RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 HIST1H2BHQ93079 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BNQ99877 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BMQ99879 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
MCF2L-227ENST00000486806 K7EMI3 77 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 TCAPO15273 167 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 ESDP10768 282 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 Q0VG73 95 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 DEFB104AQ8WTQ1 72 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 CHCHD7Q9BUK0 85 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 MRPS16Q9Y3D3 137 aaKnown RBP6.57□□□□□ -1.36
MCF2L-227ENST00000486806 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 SACSQ9NZJ4 4579 aa6.57□□□□□ -1.36
MCF2L-227ENST00000486806 TRBV25-1A0A075B6N4 114 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 AMTP48728 403 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 CCL18P55774 89 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 LINC00310P59036 64 aa6.56□□□□□ -1.36
MCF2L-227ENST00000486806 FCER1GP30273 86 aa6.55□□□□□ -1.36
MCF2L-227ENST00000486806 PRSS3P2Q8NHM4 247 aa6.55□□□□□ -1.36
MCF2L-227ENST00000486806 TMEM243Q9BU79 118 aa6.55□□□□□ -1.36
MCF2L-227ENST00000486806 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
MCF2L-227ENST00000486806 HYDINQ4G0P3 5121 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 DNAH6Q9C0G6 4158 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 A0A096LNJ9 63 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 LINC00614P0C842 121 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 RAB5BP61020 215 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 LAGE3Q14657 143 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 ORMDL2Q53FV1 153 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
MCF2L-227ENST00000486806 FA2HQ7L5A8 372 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 NIT1Q86X76 327 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 WFDC10BQ8IUB3 73 aa6.54□□□□□ -1.36
MCF2L-227ENST00000486806 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
MCF2L-227ENST00000486806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
MCF2L-227ENST00000486806 TRAV8-6A0A0B4J262 113 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
MCF2L-227ENST00000486806 H7C423 109 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 SERF1AO75920 110 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 RNASEKQ6P5S7 137 aaKnown RBP6.53□□□□□ -1.36
MCF2L-227ENST00000486806 BAGE3Q86Y29 109 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
MCF2L-227ENST00000486806 KMT2CQ8NEZ4 4911 aaKnown RBP6.52□□□□□ -1.37
MCF2L-227ENST00000486806 DNAH10OSP0CZ25 163 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.37
MCF2L-227ENST00000486806 LINC01556Q5JQF7 62 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
MCF2L-227ENST00000486806 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 Q8N3U1 123 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 CHCHD5Q9BSY4 110 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 UBE2D4Q9Y2X8 147 aa6.52□□□□□ -1.37
MCF2L-227ENST00000486806 NUPR1O60356 82 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 FGF6P10767 208 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 PKIAP61925 76 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 GAGE6Q13070 117 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 MPV17L2Q567V2 206 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 C2orf66Q6UXQ4 117 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 TOMM6Q96B49 74 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 CYSLTR1Q9Y271 337 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 RYR2Q92736 4967 aa6.51□□□□□ -1.37
MCF2L-227ENST00000486806 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 A0A1B0GUV1 79 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 UBE2L6O14933 153 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 SIVA1O15304 175 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 HBDP02042 147 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 ZNF25P17030 456 aaPredicted RBP6.5□□□□□ -1.37
MCF2L-227ENST00000486806 BTF3P20290 206 aaKnown RBP6.5□□□□□ -1.37
MCF2L-227ENST00000486806 RBX1P62877 108 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 TIMM21Q9BVV7 248 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 Q9H8V8 135 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 CSDC2Q9Y534 153 aaKnown RBP6.5□□□□□ -1.37
MCF2L-227ENST00000486806 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
MCF2L-227ENST00000486806 IGLV4-60A0A075B6I1 120 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 A0A087WX48 190 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 HSBP1O75506 76 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 G0S2P27469 103 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 NDUFA6P56556 154 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 PDZD11Q5EBL8 140 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 Q8N976 141 aa6.49□□□□□ -1.37
MCF2L-227ENST00000486806 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 IGHV3-30P01768 117 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 NPSP0C0P6 89 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 IGHV3-30-5P0DP03 117 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms