RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PAGE4O60829 102 aa11.81□□□□□ -0.52
CHRD-216ENST00000486066 FOXI1Q12951 378 aa11.81□□□□□ -0.52
CHRD-216ENST00000486066 MGPP08493 103 aa11.8□□□□□ -0.52
CHRD-216ENST00000486066 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
CHRD-216ENST00000486066 CYTL1Q9NRR1 136 aa11.8□□□□□ -0.52
CHRD-216ENST00000486066 AMTP48728 403 aa11.78□□□□□ -0.52
CHRD-216ENST00000486066 DEFA1P59665 94 aa11.78□□□□□ -0.52
CHRD-216ENST00000486066 G3V3Q6 166 aa11.77□□□□□ -0.53
CHRD-216ENST00000486066 UBE2L6O14933 153 aa11.77□□□□□ -0.53
CHRD-216ENST00000486066 GIPP09681 153 aaPredicted RBP11.77□□□□□ -0.53
CHRD-216ENST00000486066 COTL1Q14019 142 aa11.77□□□□□ -0.53
CHRD-216ENST00000486066 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
CHRD-216ENST00000486066 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
CHRD-216ENST00000486066 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
CHRD-216ENST00000486066 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
CHRD-216ENST00000486066 CACNG7P62955 275 aa11.75□□□□□ -0.53
CHRD-216ENST00000486066 PKIGQ9Y2B9 76 aa11.75□□□□□ -0.53
CHRD-216ENST00000486066 C19orf71A6NCJ1 209 aa11.74□□□□□ -0.53
CHRD-216ENST00000486066 NTF3P20783 257 aa11.74□□□□□ -0.53
CHRD-216ENST00000486066 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
CHRD-216ENST00000486066 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
CHRD-216ENST00000486066 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
CHRD-216ENST00000486066 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
CHRD-216ENST00000486066 PTTG1IPP53801 180 aa11.73□□□□□ -0.53
CHRD-216ENST00000486066 Q6ZNX1 250 aa11.73□□□□□ -0.53
CHRD-216ENST00000486066 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
CHRD-216ENST00000486066 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
CHRD-216ENST00000486066 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
CHRD-216ENST00000486066 H7C423 109 aa11.72□□□□□ -0.53
CHRD-216ENST00000486066 LCE2AQ5TA79 106 aaPredicted RBP11.72□□□□□ -0.53
CHRD-216ENST00000486066 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
CHRD-216ENST00000486066 IGHV1-58A0A0C4DH39 117 aa11.71□□□□□ -0.53
CHRD-216ENST00000486066 RPS20P60866 119 aaKnown RBP11.71□□□□□ -0.53
CHRD-216ENST00000486066 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
CHRD-216ENST00000486066 C11orf52Q96A22 123 aa11.71□□□□□ -0.53
CHRD-216ENST00000486066 TPPP3Q9BW30 176 aa11.71□□□□□ -0.53
CHRD-216ENST00000486066 F2Z2F3 143 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 NCR2O95944 276 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 TRGC1P0CF51 173 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 OR2D3Q8NGH3 330 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 MUC17Q685J3 4493 aa11.7□□□□□ -0.54
CHRD-216ENST00000486066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
CHRD-216ENST00000486066 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
CHRD-216ENST00000486066 FGF6P10767 208 aa11.69□□□□□ -0.54
CHRD-216ENST00000486066 PRR26Q8N8Z3 221 aa11.69□□□□□ -0.54
CHRD-216ENST00000486066 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
CHRD-216ENST00000486066 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
CHRD-216ENST00000486066 PFDN1O60925 122 aa11.68□□□□□ -0.54
CHRD-216ENST00000486066 XCL1P47992 114 aa11.68□□□□□ -0.54
CHRD-216ENST00000486066 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
CHRD-216ENST00000486066 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
CHRD-216ENST00000486066 CCL25O15444 150 aa11.67□□□□□ -0.54
CHRD-216ENST00000486066 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
CHRD-216ENST00000486066 CTRLP40313 264 aa11.67□□□□□ -0.54
CHRD-216ENST00000486066 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
CHRD-216ENST00000486066 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
CHRD-216ENST00000486066 KRTAP9-6A0A140TA67 174 aa11.66□□□□□ -0.54
CHRD-216ENST00000486066 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
CHRD-216ENST00000486066 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
CHRD-216ENST00000486066 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
CHRD-216ENST00000486066 A0A1B0GV50 99 aa11.65□□□□□ -0.54
CHRD-216ENST00000486066 KCNRGQ8N5I3 272 aa11.65□□□□□ -0.54
CHRD-216ENST00000486066 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
CHRD-216ENST00000486066 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
CHRD-216ENST00000486066 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
CHRD-216ENST00000486066 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
CHRD-216ENST00000486066 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 UMAD1C9J7I0 102 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 APCSP02743 223 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 KRTAP1-4P0C5Y4 121 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 ESDP10768 282 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 CAMPP49913 170 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
CHRD-216ENST00000486066 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
CHRD-216ENST00000486066 ARPC5O15511 151 aa11.62□□□□□ -0.55
CHRD-216ENST00000486066 MT-ND6P03923 174 aa11.62□□□□□ -0.55
CHRD-216ENST00000486066 C1orf137Q5JT78 98 aa11.62□□□□□ -0.55
CHRD-216ENST00000486066 XKRY2A2RUG3 117 aa11.61□□□□□ -0.55
CHRD-216ENST00000486066 SDHAF1A6NFY7 115 aa11.61□□□□□ -0.55
CHRD-216ENST00000486066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
CHRD-216ENST00000486066 ZNF561-AS1K7EIQ3 104 aa11.61□□□□□ -0.55
CHRD-216ENST00000486066 IFNA1P01562 189 aa11.61□□□□□ -0.55
CHRD-216ENST00000486066 BCL2P10415 239 aa11.61□□□□□ -0.55
CHRD-216ENST00000486066 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
CHRD-216ENST00000486066 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 RAB19A4D1S5 217 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 CCL20P78556 96 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 PHF5AQ7RTV0 110 aaKnown RBP11.6□□□□□ -0.55
CHRD-216ENST00000486066 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
CHRD-216ENST00000486066 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
CHRD-216ENST00000486066 H0Y9J4 135 aa11.59□□□□□ -0.55
CHRD-216ENST00000486066 APOMO95445 188 aa11.59□□□□□ -0.55
CHRD-216ENST00000486066 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
CHRD-216ENST00000486066 DIRC1Q969H9 104 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms