RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 LINC01551Q86U37 167 aa13.2□□□□□ -0.3
CHRD-215ENST00000485883 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
CHRD-215ENST00000485883 IGHV1-24A0A0C4DH33 117 aa13.19□□□□□ -0.3
CHRD-215ENST00000485883 CRPP02741 224 aa13.19□□□□□ -0.3
CHRD-215ENST00000485883 IQCJQ1A5X6 159 aa13.19□□□□□ -0.3
CHRD-215ENST00000485883 C15orf54Q8N8G6 183 aa13.19□□□□□ -0.3
CHRD-215ENST00000485883 ANGP03950 147 aaKnown RBP13.18□□□□□ -0.3
CHRD-215ENST00000485883 TEX261Q6UWH6 196 aa13.18□□□□□ -0.3
CHRD-215ENST00000485883 BORCS7Q96B45 105 aa13.18□□□□□ -0.3
CHRD-215ENST00000485883 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
CHRD-215ENST00000485883 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
CHRD-215ENST00000485883 GAGE6Q13070 117 aa13.17□□□□□ -0.3
CHRD-215ENST00000485883 OSTCQ9NRP0 149 aa13.17□□□□□ -0.3
CHRD-215ENST00000485883 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
CHRD-215ENST00000485883 FOXA3P55318 350 aaPredicted RBP13.15□□□□□ -0.3
CHRD-215ENST00000485883 RBX1P62877 108 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 C14orf177Q52M58 125 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 UBR4Q5T4S7 5183 aa13.15□□□□□ -0.3
CHRD-215ENST00000485883 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
CHRD-215ENST00000485883 PEA15Q15121 130 aa13.14□□□□□ -0.31
CHRD-215ENST00000485883 TMEM241Q24JQ0 296 aa13.14□□□□□ -0.31
CHRD-215ENST00000485883 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
CHRD-215ENST00000485883 GATD1Q8NB37 220 aa13.14□□□□□ -0.31
CHRD-215ENST00000485883 TRAV26-2A0A0B4J265 109 aa13.13□□□□□ -0.31
CHRD-215ENST00000485883 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
CHRD-215ENST00000485883 OXTP01178 125 aa13.13□□□□□ -0.31
CHRD-215ENST00000485883 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
CHRD-215ENST00000485883 COTL1Q14019 142 aa13.13□□□□□ -0.31
CHRD-215ENST00000485883 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
CHRD-215ENST00000485883 HIGD1CA8MV81 97 aa13.12□□□□□ -0.31
CHRD-215ENST00000485883 PRSS1P07477 247 aa13.12□□□□□ -0.31
CHRD-215ENST00000485883 HNRNPA3P51991 378 aaKnown RBP13.12□□□□□ -0.31
CHRD-215ENST00000485883 MIAQ16674 131 aa13.12□□□□□ -0.31
CHRD-215ENST00000485883 SMDT1Q9H4I9 107 aa13.12□□□□□ -0.31
CHRD-215ENST00000485883 AMTP48728 403 aa13.11□□□□□ -0.31
CHRD-215ENST00000485883 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
CHRD-215ENST00000485883 ISOC2Q96AB3 205 aa13.11□□□□□ -0.31
CHRD-215ENST00000485883 NAT8Q9UHE5 227 aa13.11□□□□□ -0.31
CHRD-215ENST00000485883 C9JQL5 133 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 UBE2L6O14933 153 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
CHRD-215ENST00000485883 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
CHRD-215ENST00000485883 ADIRFQ15847 76 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 PRR34Q9NV39 138 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 V9GYV3 84 aa13.1□□□□□ -0.31
CHRD-215ENST00000485883 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
CHRD-215ENST00000485883 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
CHRD-215ENST00000485883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.09□□□□□ -0.31
CHRD-215ENST00000485883 PANO1I0J062 215 aa13.08□□□□□ -0.32
CHRD-215ENST00000485883 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
CHRD-215ENST00000485883 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
CHRD-215ENST00000485883 NCR2O95944 276 aa13.07□□□□□ -0.32
CHRD-215ENST00000485883 RIGQ13278 110 aa13.07□□□□□ -0.32
CHRD-215ENST00000485883 C9orf163Q8N9P6 203 aa13.07□□□□□ -0.32
CHRD-215ENST00000485883 TMEM191AQ9H0A3 160 aa13.07□□□□□ -0.32
CHRD-215ENST00000485883 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
CHRD-215ENST00000485883 REG3AQ06141 175 aa13.06□□□□□ -0.32
CHRD-215ENST00000485883 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
CHRD-215ENST00000485883 C20orf203Q8NBC4 194 aa13.05□□□□□ -0.32
CHRD-215ENST00000485883 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
CHRD-215ENST00000485883 NAT8BQ9UHF3 227 aa13.05□□□□□ -0.32
CHRD-215ENST00000485883 TRBV6-5A0A0K0K1A5 114 aa13.04□□□□□ -0.32
CHRD-215ENST00000485883 APCSP02743 223 aa13.04□□□□□ -0.32
CHRD-215ENST00000485883 PLA2G2DQ9UNK4 145 aa13.04□□□□□ -0.32
CHRD-215ENST00000485883 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
CHRD-215ENST00000485883 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
CHRD-215ENST00000485883 MRAP2Q96G30 205 aa13.03□□□□□ -0.32
CHRD-215ENST00000485883 ST20Q9HBF5 79 aa13.03□□□□□ -0.32
CHRD-215ENST00000485883 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
CHRD-215ENST00000485883 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.33
CHRD-215ENST00000485883 PMCHP20382 165 aa13.02□□□□□ -0.33
CHRD-215ENST00000485883 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
CHRD-215ENST00000485883 RNF185Q96GF1 192 aa13.02□□□□□ -0.33
CHRD-215ENST00000485883 I3L3M4 83 aa13.01□□□□□ -0.33
CHRD-215ENST00000485883 RAB4AP20338 218 aa13.01□□□□□ -0.33
CHRD-215ENST00000485883 RAB14P61106 215 aa13.01□□□□□ -0.33
CHRD-215ENST00000485883 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
CHRD-215ENST00000485883 SMIM27A0A1W2PRY6 76 aa13□□□□□ -0.33
CHRD-215ENST00000485883 H7C423 109 aa13□□□□□ -0.33
CHRD-215ENST00000485883 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
CHRD-215ENST00000485883 A0A1B0GW15 77 aa12.98□□□□□ -0.33
CHRD-215ENST00000485883 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
CHRD-215ENST00000485883 GAS8-AS1O95177 125 aa12.98□□□□□ -0.33
CHRD-215ENST00000485883 PPP1R17O96001 155 aa12.98□□□□□ -0.33
CHRD-215ENST00000485883 RNASEKQ6P5S7 137 aaKnown RBP12.98□□□□□ -0.33
CHRD-215ENST00000485883 SLPIP03973 132 aa12.97□□□□□ -0.33
CHRD-215ENST00000485883 MT1HL1P0DM35 61 aa12.97□□□□□ -0.33
CHRD-215ENST00000485883 RPS10P46783 165 aaKnown RBP12.97□□□□□ -0.33
CHRD-215ENST00000485883 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
CHRD-215ENST00000485883 TMEM242Q9NWH2 141 aa12.97□□□□□ -0.33
CHRD-215ENST00000485883 FGF6P10767 208 aa12.96□□□□□ -0.33
CHRD-215ENST00000485883 TRBV27A0A0K0K1C4 114 aa12.95□□□□□ -0.34
CHRD-215ENST00000485883 hDV102S1A0JD36 115 aa12.95□□□□□ -0.34
CHRD-215ENST00000485883 SMKR1H3BMG3 65 aa12.95□□□□□ -0.34
CHRD-215ENST00000485883 TSHBP01222 138 aa12.95□□□□□ -0.34
CHRD-215ENST00000485883 S100A8P05109 93 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms