RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 RAB5CP51148 216 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 RPS20P60866 119 aaKnown RBP6.82□□□□□ -1.32
HMGN1-215ENST00000485550 REG3AQ06141 175 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 IQCJQ1A5X6 159 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 LYZL1Q6UWQ5 148 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 TEX46H3BTG2 121 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 H7C1H1 209 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 IFNA1P01562 189 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 MT1HL1P0DM35 61 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 CACNG7P62955 275 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 MEF2BQ02080 365 aaPredicted RBP6.81□□□□□ -1.32
HMGN1-215ENST00000485550 RASL11AQ6T310 242 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 C20orf203Q8NBC4 194 aa6.81□□□□□ -1.32
HMGN1-215ENST00000485550 TRBV20OR9-2A0A075B6H5 130 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 IGLV4-60A0A075B6I1 120 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 XKRY2A2RUG3 117 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 PANO1I0J062 215 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 PDE6DO43924 150 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 NTF3P20783 257 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 SULT1A2P50226 295 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 DGAT2L7PQ6IED9 249 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 EIF5AL1Q6IS14 154 aaKnown RBP6.8□□□□□ -1.32
HMGN1-215ENST00000485550 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
HMGN1-215ENST00000485550 F2Z2F3 143 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 TRGC1P0CF51 173 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
HMGN1-215ENST00000485550 TWIST1Q15672 202 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 TMEM243Q9BU79 118 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 DPH3P1Q9H4G8 78 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
HMGN1-215ENST00000485550 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 IGKV3OR2-268A0A0C4DH90 116 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 UBE2L6O14933 153 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 BCL2P10415 239 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 SDIM1Q6ZPB5 146 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 C9orf62Q8N4C0 152 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
HMGN1-215ENST00000485550 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
HMGN1-215ENST00000485550 AMTP48728 403 aa6.77□□□□□ -1.33
HMGN1-215ENST00000485550 COTL1Q14019 142 aa6.77□□□□□ -1.33
HMGN1-215ENST00000485550 CLRN3Q8NCR9 226 aa6.77□□□□□ -1.33
HMGN1-215ENST00000485550 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
HMGN1-215ENST00000485550 TRAV8-4A0A0B4J246 113 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 K7EN84 100 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 SLPIP03973 132 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 FOXA3P55318 350 aaPredicted RBP6.76□□□□□ -1.33
HMGN1-215ENST00000485550 SLC51BQ86UW2 128 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 OCC1Q8TAD7 63 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 PGLYRP4Q96LB8 373 aa6.76□□□□□ -1.33
HMGN1-215ENST00000485550 RPP21Q9H633 154 aaKnown RBP6.76□□□□□ -1.33
HMGN1-215ENST00000485550 TNXBP22105 4242 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 CTRLP40313 264 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 TCTE3Q8IZS6 198 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 RPL39LQ96EH5 51 aaKnown RBP6.75□□□□□ -1.33
HMGN1-215ENST00000485550 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
HMGN1-215ENST00000485550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
HMGN1-215ENST00000485550 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
HMGN1-215ENST00000485550 CHTF8P0CG12 524 aa6.74□□□□□ -1.33
HMGN1-215ENST00000485550 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
HMGN1-215ENST00000485550 Q6ZNX1 250 aa6.74□□□□□ -1.33
HMGN1-215ENST00000485550 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
HMGN1-215ENST00000485550 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 GATCO43716 136 aaKnown RBP6.73□□□□□ -1.33
HMGN1-215ENST00000485550 CEBPGP53567 150 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 HIGD2BQ4VC39 106 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 RNASEKQ6P5S7 137 aaKnown RBP6.73□□□□□ -1.33
HMGN1-215ENST00000485550 SMIM15Q7Z3B0 74 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
HMGN1-215ENST00000485550 A0A087WYN8 130 aa6.72□□□□□ -1.33
HMGN1-215ENST00000485550 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-215ENST00000485550 TAGLN2P37802 199 aaKnown RBP6.72□□□□□ -1.33
HMGN1-215ENST00000485550 C15orf56Q8N910 161 aa6.72□□□□□ -1.33
HMGN1-215ENST00000485550 CNFNQ9BYD5 112 aa6.72□□□□□ -1.33
HMGN1-215ENST00000485550 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 APCSP02743 223 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 PMCHP20382 165 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 ODF1Q14990 250 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 ALKAL2Q6UX46 152 aa6.71□□□□□ -1.34
HMGN1-215ENST00000485550 CHCHD10Q8WYQ3 142 aaPredicted RBP6.71□□□□□ -1.34
HMGN1-215ENST00000485550 hCG_2014768A0A024R1R8 64 aa6.7□□□□□ -1.34
HMGN1-215ENST00000485550 FGF6P10767 208 aa6.7□□□□□ -1.34
HMGN1-215ENST00000485550 COX6A2Q02221 97 aa6.7□□□□□ -1.34
HMGN1-215ENST00000485550 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
HMGN1-215ENST00000485550 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
HMGN1-215ENST00000485550 CFAP161Q6P656 301 aa6.7□□□□□ -1.34
HMGN1-215ENST00000485550 Q6ZRU5 148 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms