RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 COTL1Q14019 142 aa16.53■□□□□ 0.24
HLA-F-227ENST00000485513 TWIST1Q15672 202 aa16.53■□□□□ 0.24
HLA-F-227ENST00000485513 CNFNQ9BYD5 112 aa16.53■□□□□ 0.24
HLA-F-227ENST00000485513 GFRA4Q9GZZ7 299 aa16.53■□□□□ 0.24
HLA-F-227ENST00000485513 RPP21Q9H633 154 aaKnown RBP16.53■□□□□ 0.24
HLA-F-227ENST00000485513 AMTP48728 403 aa16.52■□□□□ 0.24
HLA-F-227ENST00000485513 SDIM1Q6ZPB5 146 aa16.52■□□□□ 0.24
HLA-F-227ENST00000485513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.52■□□□□ 0.24
HLA-F-227ENST00000485513 LRP1Q07954 4544 aaKnown RBP16.51■□□□□ 0.23
HLA-F-227ENST00000485513 hDV102S1A0JD36 115 aa16.51■□□□□ 0.23
HLA-F-227ENST00000485513 OXTP01178 125 aa16.51■□□□□ 0.23
HLA-F-227ENST00000485513 RNASE7Q9H1E1 156 aaKnown RBP16.51■□□□□ 0.23
HLA-F-227ENST00000485513 K7EN84 100 aa16.5■□□□□ 0.23
HLA-F-227ENST00000485513 CNBPP62633 177 aaKnown RBP16.5■□□□□ 0.23
HLA-F-227ENST00000485513 PANO1I0J062 215 aa16.49■□□□□ 0.23
HLA-F-227ENST00000485513 GATD1Q8NB37 220 aa16.49■□□□□ 0.23
HLA-F-227ENST00000485513 OCC1Q8TAD7 63 aa16.49■□□□□ 0.23
HLA-F-227ENST00000485513 TRAV26-2A0A0B4J265 109 aa16.47■□□□□ 0.23
HLA-F-227ENST00000485513 AP5S1Q9NUS5 200 aa16.47■□□□□ 0.23
HLA-F-227ENST00000485513 SMIM15Q7Z3B0 74 aa16.45■□□□□ 0.22
HLA-F-227ENST00000485513 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.44■□□□□ 0.22
HLA-F-227ENST00000485513 GTSF1Q8WW33 167 aa16.44■□□□□ 0.22
HLA-F-227ENST00000485513 FAT3Q8TDW7 4589 aa16.44■□□□□ 0.22
HLA-F-227ENST00000485513 IGHV3-64A0A075B6Q5 118 aa16.43■□□□□ 0.22
HLA-F-227ENST00000485513 RPL39LQ96EH5 51 aaKnown RBP16.43■□□□□ 0.22
HLA-F-227ENST00000485513 SLPIP03973 132 aa16.42■□□□□ 0.22
HLA-F-227ENST00000485513 CIRBPQ14011 172 aaKnown RBP16.42■□□□□ 0.22
HLA-F-227ENST00000485513 SERTAD4-AS1Q5TG53 156 aa16.42■□□□□ 0.22
HLA-F-227ENST00000485513 PKHD1L1Q86WI1 4243 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 IGKV3OR2-268A0A0C4DH90 116 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 GAGE12HA6NDE8 117 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 TMEM250H0YL14 139 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 GATCO43716 136 aaKnown RBP16.41■□□□□ 0.22
HLA-F-227ENST00000485513 NCR2O95944 276 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 HNRNPA3P51991 378 aaKnown RBP16.41■□□□□ 0.22
HLA-F-227ENST00000485513 FOXA3P55318 350 aaPredicted RBP16.41■□□□□ 0.22
HLA-F-227ENST00000485513 AMMECR1LQ6DCA0 310 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 Q6ZNX1 250 aa16.41■□□□□ 0.22
HLA-F-227ENST00000485513 TEX261Q6UWH6 196 aa16.4■□□□□ 0.22
HLA-F-227ENST00000485513 BLOC1S1P78537 153 aa16.39■□□□□ 0.21
HLA-F-227ENST00000485513 CFAP161Q6P656 301 aa16.39■□□□□ 0.21
HLA-F-227ENST00000485513 C15orf56Q8N910 161 aa16.39■□□□□ 0.21
HLA-F-227ENST00000485513 DPH3Q96FX2 82 aa16.39■□□□□ 0.21
HLA-F-227ENST00000485513 A8MWL6 223 aa16.38■□□□□ 0.21
HLA-F-227ENST00000485513 APCSP02743 223 aa16.38■□□□□ 0.21
HLA-F-227ENST00000485513 ALKAL2Q6UX46 152 aa16.38■□□□□ 0.21
HLA-F-227ENST00000485513 FAM231DQ6ZW35 169 aa16.38■□□□□ 0.21
HLA-F-227ENST00000485513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.37■□□□□ 0.21
HLA-F-227ENST00000485513 IGKV2-29A2NJV5 120 aaPredicted RBP16.37■□□□□ 0.21
HLA-F-227ENST00000485513 SDHAF1A6NFY7 115 aa16.37■□□□□ 0.21
HLA-F-227ENST00000485513 H7C423 109 aa16.37■□□□□ 0.21
HLA-F-227ENST00000485513 RNASEKQ6P5S7 137 aaKnown RBP16.37■□□□□ 0.21
HLA-F-227ENST00000485513 RNF185Q96GF1 192 aa16.37■□□□□ 0.21
HLA-F-227ENST00000485513 CHTF8P0CG12 524 aa16.36■□□□□ 0.21
HLA-F-227ENST00000485513 CEBPGP53567 150 aa16.35■□□□□ 0.21
HLA-F-227ENST00000485513 AKAP14Q86UN6 197 aa16.35■□□□□ 0.21
HLA-F-227ENST00000485513 CHCHD10Q8WYQ3 142 aaPredicted RBP16.35■□□□□ 0.21
HLA-F-227ENST00000485513 A0A087WYN8 130 aa16.34■□□□□ 0.21
HLA-F-227ENST00000485513 FGF6P10767 208 aa16.34■□□□□ 0.21
HLA-F-227ENST00000485513 LYPD6BQ8NI32 183 aa16.34■□□□□ 0.21
HLA-F-227ENST00000485513 SPACA4Q8TDM5 124 aa16.34■□□□□ 0.21
HLA-F-227ENST00000485513 PMCHP20382 165 aa16.33■□□□□ 0.2
HLA-F-227ENST00000485513 HIGD2BQ4VC39 106 aa16.33■□□□□ 0.2
HLA-F-227ENST00000485513 CT83Q5H943 113 aa16.33■□□□□ 0.2
HLA-F-227ENST00000485513 I3L3M4 83 aa16.32■□□□□ 0.2
HLA-F-227ENST00000485513 RPS10P46783 165 aaKnown RBP16.32■□□□□ 0.2
HLA-F-227ENST00000485513 BORCS7Q96B45 105 aa16.32■□□□□ 0.2
HLA-F-227ENST00000485513 TRBV6-5A0A0K0K1A5 114 aa16.31■□□□□ 0.2
HLA-F-227ENST00000485513 ZNF25P17030 456 aaPredicted RBP16.31■□□□□ 0.2
HLA-F-227ENST00000485513 FAM231BA6NCW3 169 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 COX6A2Q02221 97 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 OR5A1Q8NGJ0 315 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 BTF3L4Q96K17 158 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 SMIM7Q9BQ49 75 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 PLAC8Q9NZF1 115 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 HMCN2Q8NDA2 5059 aa16.29■□□□□ 0.2
HLA-F-227ENST00000485513 hCG_2014768A0A024R1R8 64 aa16.28■□□□□ 0.2
HLA-F-227ENST00000485513 GAS8-AS1O95177 125 aa16.28■□□□□ 0.2
HLA-F-227ENST00000485513 TMEM101Q96IK0 257 aa16.28■□□□□ 0.2
HLA-F-227ENST00000485513 EIF5A2Q9GZV4 153 aaKnown RBP16.28■□□□□ 0.2
HLA-F-227ENST00000485513 ST20Q9HBF5 79 aa16.28■□□□□ 0.2
HLA-F-227ENST00000485513 GVQW2A0A096LPI5 108 aaPredicted RBP16.27■□□□□ 0.2
HLA-F-227ENST00000485513 A0A1B0GUT8 65 aa16.27■□□□□ 0.2
HLA-F-227ENST00000485513 FOXI1Q12951 378 aa16.27■□□□□ 0.2
HLA-F-227ENST00000485513 Q6ZRU5 148 aa16.27■□□□□ 0.2
HLA-F-227ENST00000485513 LINC01551Q86U37 167 aa16.27■□□□□ 0.2
HLA-F-227ENST00000485513 TSKUQ8WUA8 353 aa16.27■□□□□ 0.2
HLA-F-227ENST00000485513 HIGD1CA8MV81 97 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 NDUFS6O75380 124 aaKnown RBP16.26■□□□□ 0.19
HLA-F-227ENST00000485513 TSHBP01222 138 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 ESDP10768 282 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 PRSS3P2Q8NHM4 247 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 TMEM191AQ9H0A3 160 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 TMEM242Q9NWH2 141 aa16.26■□□□□ 0.19
HLA-F-227ENST00000485513 XCL1P47992 114 aa16.25■□□□□ 0.19
HLA-F-227ENST00000485513 MRAP2Q96G30 205 aa16.25■□□□□ 0.19
HLA-F-227ENST00000485513 FAM210AQ96ND0 272 aa16.25■□□□□ 0.19
HLA-F-227ENST00000485513 PLA2G2DQ9UNK4 145 aa16.25■□□□□ 0.19
HLA-F-227ENST00000485513 MAJINQ3KP22 176 aa16.24■□□□□ 0.19
HLA-F-227ENST00000485513 C7orf33Q8WU49 177 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms