RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 OCC1Q8TAD7 63 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 PGLYRP4Q96LB8 373 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 TMEM243Q9BU79 118 aa6.1□□□□□ -1.43
NUP50-215ENST00000484186 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 IGLV10-54A0A075B6I4 117 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 CTRLP40313 264 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
NUP50-215ENST00000484186 COTL1Q14019 142 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 FAM210AQ96ND0 272 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 CNFNQ9BYD5 112 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
NUP50-215ENST00000484186 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
NUP50-215ENST00000484186 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.43
NUP50-215ENST00000484186 K7EN84 100 aa6.08□□□□□ -1.44
NUP50-215ENST00000484186 UBE2L6O14933 153 aa6.08□□□□□ -1.44
NUP50-215ENST00000484186 GATD1Q8NB37 220 aa6.08□□□□□ -1.44
NUP50-215ENST00000484186 GFRA4Q9GZZ7 299 aa6.08□□□□□ -1.44
NUP50-215ENST00000484186 SMDT1Q9H4I9 107 aa6.08□□□□□ -1.44
NUP50-215ENST00000484186 AMTP48728 403 aa6.07□□□□□ -1.44
NUP50-215ENST00000484186 SDIM1Q6ZPB5 146 aa6.07□□□□□ -1.44
NUP50-215ENST00000484186 SMIM15Q7Z3B0 74 aa6.07□□□□□ -1.44
NUP50-215ENST00000484186 EIF5A2Q9GZV4 153 aaKnown RBP6.07□□□□□ -1.44
NUP50-215ENST00000484186 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
NUP50-215ENST00000484186 hDV102S1A0JD36 115 aa6.06□□□□□ -1.44
NUP50-215ENST00000484186 GATCO43716 136 aaKnown RBP6.06□□□□□ -1.44
NUP50-215ENST00000484186 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
NUP50-215ENST00000484186 GTSF1Q8WW33 167 aa6.06□□□□□ -1.44
NUP50-215ENST00000484186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
NUP50-215ENST00000484186 A8MWL6 223 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 PANO1I0J062 215 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 OXTP01178 125 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 FOXA3P55318 350 aaPredicted RBP6.05□□□□□ -1.44
NUP50-215ENST00000484186 RAB14P61106 215 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
NUP50-215ENST00000484186 PEA15Q15121 130 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 FAM231DQ6ZW35 169 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
NUP50-215ENST00000484186 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.04□□□□□ -1.44
NUP50-215ENST00000484186 H7C423 109 aa6.04□□□□□ -1.44
NUP50-215ENST00000484186 NCR2O95944 276 aa6.04□□□□□ -1.44
NUP50-215ENST00000484186 SLPIP03973 132 aa6.04□□□□□ -1.44
NUP50-215ENST00000484186 SRP19P09132 144 aaKnown RBP6.04□□□□□ -1.44
NUP50-215ENST00000484186 FAM74A3Q4VXF1 159 aa6.04□□□□□ -1.44
NUP50-215ENST00000484186 AMMECR1LQ6DCA0 310 aa6.04□□□□□ -1.44
NUP50-215ENST00000484186 RPL39LQ96EH5 51 aaKnown RBP6.04□□□□□ -1.44
NUP50-215ENST00000484186 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 IGKV3OR2-268A0A0C4DH90 116 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 GAGE12HA6NDE8 117 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 ZNF727A8MUV8 499 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 APCSP02743 223 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 CEBPGP53567 150 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
NUP50-215ENST00000484186 CT83Q5H943 113 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 SMIM7Q9BQ49 75 aa6.03□□□□□ -1.44
NUP50-215ENST00000484186 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
NUP50-215ENST00000484186 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.02□□□□□ -1.45
NUP50-215ENST00000484186 IGKV2-29A2NJV5 120 aaPredicted RBP6.02□□□□□ -1.45
NUP50-215ENST00000484186 I3L3M4 83 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 PMCHP20382 165 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 RNASEKQ6P5S7 137 aaKnown RBP6.02□□□□□ -1.45
NUP50-215ENST00000484186 C15orf56Q8N910 161 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 BORCS7Q96B45 105 aa6.02□□□□□ -1.45
NUP50-215ENST00000484186 TRBV6-5A0A0K0K1A5 114 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 FAM231BA6NCW3 169 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 FGF6P10767 208 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 LINC01551Q86U37 167 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 CHCHD10Q8WYQ3 142 aaPredicted RBP6.01□□□□□ -1.45
NUP50-215ENST00000484186 RNF185Q96GF1 192 aa6.01□□□□□ -1.45
NUP50-215ENST00000484186 A0A087WYN8 130 aa6□□□□□ -1.45
NUP50-215ENST00000484186 A0A1B0GUT8 65 aa6□□□□□ -1.45
NUP50-215ENST00000484186 HIGD1CA8MV81 97 aa6□□□□□ -1.45
NUP50-215ENST00000484186 GAS8-AS1O95177 125 aa6□□□□□ -1.45
NUP50-215ENST00000484186 ZNF25P17030 456 aaPredicted RBP6□□□□□ -1.45
NUP50-215ENST00000484186 RPS10P46783 165 aaKnown RBP6□□□□□ -1.45
NUP50-215ENST00000484186 HNRNPA3P51991 378 aaKnown RBP6□□□□□ -1.45
NUP50-215ENST00000484186 TMEM241Q24JQ0 296 aa6□□□□□ -1.45
NUP50-215ENST00000484186 OR5A1Q8NGJ0 315 aa6□□□□□ -1.45
NUP50-215ENST00000484186 TSKUQ8WUA8 353 aa6□□□□□ -1.45
NUP50-215ENST00000484186 TMEM101Q96IK0 257 aa6□□□□□ -1.45
NUP50-215ENST00000484186 TMEM191AQ9H0A3 160 aa6□□□□□ -1.45
NUP50-215ENST00000484186 ST20Q9HBF5 79 aa6□□□□□ -1.45
NUP50-215ENST00000484186 OSTCQ9NRP0 149 aa6□□□□□ -1.45
NUP50-215ENST00000484186 C9JQL5 133 aa5.99□□□□□ -1.45
NUP50-215ENST00000484186 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
NUP50-215ENST00000484186 ESDP10768 282 aa5.99□□□□□ -1.45
NUP50-215ENST00000484186 RAB4AP20338 218 aa5.99□□□□□ -1.45
NUP50-215ENST00000484186 POLR2KP53803 58 aaKnown RBP5.99□□□□□ -1.45
NUP50-215ENST00000484186 HIGD2BQ4VC39 106 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms