RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	NPY	P01303	97 aa		10.51	□□□□□ -0.73
CCM2-215	ENST00000482714	MAP1LC3A	Q9H492	121 aa		10.51	□□□□□ -0.73
CCM2-215	ENST00000482714	TRAV9-2	A0A087WT02	112 aa		10.5	□□□□□ -0.73
CCM2-215	ENST00000482714		H7C423	109 aa		10.5	□□□□□ -0.73
CCM2-215	ENST00000482714	KIAA1644	Q3SXP7	199 aa		10.5	□□□□□ -0.73
CCM2-215	ENST00000482714	NTM-AS1	Q6ZSK4	140 aa		10.5	□□□□□ -0.73
CCM2-215	ENST00000482714	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.5	□□□□□ -0.73
CCM2-215	ENST00000482714	CHCHD7	Q9BUK0	85 aa		10.5	□□□□□ -0.73
CCM2-215	ENST00000482714	DNAH10OS	P0CZ25	163 aa		10.49	□□□□□ -0.73
CCM2-215	ENST00000482714	SMIM2	Q9BVW6	85 aa		10.49	□□□□□ -0.73
CCM2-215	ENST00000482714	RAB5A	P20339	215 aa		10.49	□□□□□ -0.73
CCM2-215	ENST00000482714	NXT2	Q9NPJ8	142 aa	Known RBP	10.49	□□□□□ -0.73
CCM2-215	ENST00000482714	SCO1	O75880	301 aa		10.48	□□□□□ -0.73
CCM2-215	ENST00000482714	BTF3	P20290	206 aa	Known RBP	10.48	□□□□□ -0.73
CCM2-215	ENST00000482714	AMT	P48728	403 aa		10.48	□□□□□ -0.73
CCM2-215	ENST00000482714	LINC01556	Q5JQF7	62 aa		10.48	□□□□□ -0.73
CCM2-215	ENST00000482714		Q8N8P6	123 aa		10.48	□□□□□ -0.73
CCM2-215	ENST00000482714	TMEM243	Q9BU79	118 aa		10.48	□□□□□ -0.73
CCM2-215	ENST00000482714	DNAH6	Q9C0G6	4158 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	TSHB	P01222	138 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	ESD	P10768	282 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	G0S2	P27469	103 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	FCER1G	P30273	86 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	NIT1	Q86X76	327 aa		10.47	□□□□□ -0.73
CCM2-215	ENST00000482714	IGLV2-18	A0A075B6J9	118 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714		A0A1B0GUV1	79 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714	SMAGP	Q0VAQ4	97 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714	TTC32	Q5I0X7	151 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714	WFDC10B	Q8IUB3	73 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714	C10orf126	Q8N4M7	172 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714	CHCHD5	Q9BSY4	110 aa		10.46	□□□□□ -0.74
CCM2-215	ENST00000482714		A0A087WX48	190 aa		10.45	□□□□□ -0.74
CCM2-215	ENST00000482714	TMEM262	E9PQX1	116 aa		10.45	□□□□□ -0.74
CCM2-215	ENST00000482714	TMEM18	Q96B42	140 aa		10.45	□□□□□ -0.74
CCM2-215	ENST00000482714	LOC389332	A0A1B0GUA5	103 aa		10.44	□□□□□ -0.74
CCM2-215	ENST00000482714	UBE2L6	O14933	153 aa		10.44	□□□□□ -0.74
CCM2-215	ENST00000482714	TRGC2	P03986	189 aa		10.44	□□□□□ -0.74
CCM2-215	ENST00000482714	PRSS3P2	Q8NHM4	247 aa		10.44	□□□□□ -0.74
CCM2-215	ENST00000482714	NBDY	A0A0U1RRE5	68 aa		10.43	□□□□□ -0.74
CCM2-215	ENST00000482714	RAB5B	P61020	215 aa		10.43	□□□□□ -0.74
CCM2-215	ENST00000482714	ORMDL2	Q53FV1	153 aa		10.43	□□□□□ -0.74
CCM2-215	ENST00000482714	KMT2A	Q03164	3969 aa		10.43	□□□□□ -0.74
CCM2-215	ENST00000482714	LINC01546	A6NGU7	62 aa		10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	LINC01549	A6NIU2	74 aa		10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	IFI27	P40305	119 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	ZNF25	P17030	456 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	LAGE3	Q14657	143 aa		10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	C20orf203	Q8NBC4	194 aa		10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	C18orf32	Q8TCD1	76 aa		10.42	□□□□□ -0.74
CCM2-215	ENST00000482714	CSDC2	Q9Y534	153 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-215	ENST00000482714		Q6ZR54	194 aa		10.41	□□□□□ -0.74
CCM2-215	ENST00000482714	MRPL52	Q86TS9	123 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-215	ENST00000482714	TIMM21	Q9BVV7	248 aa		10.41	□□□□□ -0.74
CCM2-215	ENST00000482714	HYDIN	Q4G0P3	5121 aa		10.4	□□□□□ -0.74
CCM2-215	ENST00000482714	IBA57-AS1	B1ANH7	110 aa		10.4	□□□□□ -0.74
CCM2-215	ENST00000482714	LINC00614	P0C842	121 aa		10.4	□□□□□ -0.74
CCM2-215	ENST00000482714		Q0VG73	95 aa		10.4	□□□□□ -0.74
CCM2-215	ENST00000482714	GAGE6	Q13070	117 aa		10.4	□□□□□ -0.74
CCM2-215	ENST00000482714	RBX1	P62877	108 aa		10.39	□□□□□ -0.75
CCM2-215	ENST00000482714	AMMECR1L	Q6DCA0	310 aa		10.39	□□□□□ -0.75
CCM2-215	ENST00000482714	FA2H	Q7L5A8	372 aa		10.39	□□□□□ -0.75
CCM2-215	ENST00000482714	DEFB104A	Q8WTQ1	72 aa		10.39	□□□□□ -0.75
CCM2-215	ENST00000482714	IGHV3-30	P01768	117 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	IGHV3-33	P01772	117 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	IGHV3-30-3	P0DP02	117 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	IGHV3-30-5	P0DP03	117 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	FGF6	P10767	208 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	MPV17L2	Q567V2	206 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	TMEM101	Q96IK0	257 aa		10.38	□□□□□ -0.75
CCM2-215	ENST00000482714	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	TRAV8-3	A0A0A6YYJ7	113 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	NPS	P0C0P6	89 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	DGAT2L7P	Q6IED9	249 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	NFE4	Q86UQ8	179 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	AP5S1	Q9NUS5	200 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	PYGO1	Q9Y3Y4	419 aa		10.37	□□□□□ -0.75
CCM2-215	ENST00000482714	RNASEK	Q6P5S7	137 aa	Known RBP	10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	CHCHD1	Q96BP2	118 aa	Known RBP	10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	SPANXA1	Q9NS26	97 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	CYSLTR1	Q9Y271	337 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	ANG	P03950	147 aa	Known RBP	10.36	□□□□□ -0.75
CCM2-215	ENST00000482714		Q8N976	141 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	OR5A1	Q8NGJ0	315 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	PRR34	Q9NV39	138 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	KLK12	Q9UKR0	248 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714	UBE2D4	Q9Y2X8	147 aa		10.36	□□□□□ -0.75
CCM2-215	ENST00000482714		M0R2N4	97 aa		10.35	□□□□□ -0.75
CCM2-215	ENST00000482714	C2orf66	Q6UXQ4	117 aa		10.35	□□□□□ -0.75
CCM2-215	ENST00000482714	BAGE3	Q86Y29	109 aa		10.35	□□□□□ -0.75
CCM2-215	ENST00000482714	CDC42SE2	Q9NRR3	84 aa		10.35	□□□□□ -0.75
CCM2-215	ENST00000482714	MRPS36	P82909	103 aa	Known RBP	10.34	□□□□□ -0.75
CCM2-215	ENST00000482714	COX11	Q9Y6N1	276 aa		10.34	□□□□□ -0.75
CCM2-215	ENST00000482714	IGLV4-60	A0A075B6I1	120 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	TRAV8-4	A0A0B4J246	113 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	CCL25	O15444	150 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	MIA	Q16674	131 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	C1orf134	Q5TEV5	83 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	C6orf223	Q8N319	242 aa		10.33	□□□□□ -0.76
CCM2-215	ENST00000482714	ZNF664	Q8N3J9	261 aa		10.33	□□□□□ -0.76

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