RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 SNAPINO95295 136 aa11.28□□□□□ -0.6
SF1-215ENST00000482693 AMTP48728 403 aa11.28□□□□□ -0.6
SF1-215ENST00000482693 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
SF1-215ENST00000482693 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
SF1-215ENST00000482693 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.61
SF1-215ENST00000482693 TRAV8-3A0A0A6YYJ7 113 aa11.27□□□□□ -0.61
SF1-215ENST00000482693 TRBV27A0A0K0K1C4 114 aa11.27□□□□□ -0.61
SF1-215ENST00000482693 VCYO14598 125 aa11.27□□□□□ -0.61
SF1-215ENST00000482693 Q6ZRN7 208 aaPredicted RBP11.27□□□□□ -0.61
SF1-215ENST00000482693 DNAH2Q9P225 4427 aa11.27□□□□□ -0.61
SF1-215ENST00000482693 D6R8Y8 96 aa11.26□□□□□ -0.61
SF1-215ENST00000482693 SUMO2P61956 95 aaKnown RBP11.26□□□□□ -0.61
SF1-215ENST00000482693 GAGE6Q13070 117 aa11.26□□□□□ -0.61
SF1-215ENST00000482693 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
SF1-215ENST00000482693 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
SF1-215ENST00000482693 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
SF1-215ENST00000482693 PHOX2AO14813 284 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 UBE2L6O14933 153 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 APCSP02743 223 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 RBX1P62877 108 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
SF1-215ENST00000482693 TNP2Q05952 138 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
SF1-215ENST00000482693 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 H7C423 109 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 TSHBP01222 138 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 TM2D2Q9BX73 214 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 Q9HAA7 133 aa11.24□□□□□ -0.61
SF1-215ENST00000482693 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
SF1-215ENST00000482693 Q0VG73 95 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 Q8N976 141 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
SF1-215ENST00000482693 A0A1B0GVY2 172 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 FCER1GP30273 86 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 COX19Q49B96 90 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 RMI2Q96E14 147 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 COX11Q9Y6N1 276 aa11.22□□□□□ -0.61
SF1-215ENST00000482693 TCAPO15273 167 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 PSCAO43653 123 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 NPYP01303 97 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 ESDP10768 282 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 UBE2WQ96B02 151 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
SF1-215ENST00000482693 ENHOQ6UWT2 76 aa11.2□□□□□ -0.62
SF1-215ENST00000482693 SMIM2Q9BVW6 85 aa11.2□□□□□ -0.62
SF1-215ENST00000482693 PRSS47A8MTI9 375 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 CRPP02741 224 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
SF1-215ENST00000482693 AMMECR1LQ6DCA0 310 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
SF1-215ENST00000482693 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
SF1-215ENST00000482693 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
SF1-215ENST00000482693 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
SF1-215ENST00000482693 EREGO14944 169 aa11.18□□□□□ -0.62
SF1-215ENST00000482693 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SF1-215ENST00000482693 MIAQ16674 131 aa11.18□□□□□ -0.62
SF1-215ENST00000482693 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
SF1-215ENST00000482693 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
SF1-215ENST00000482693 MT-ND6P03923 174 aa11.17□□□□□ -0.62
SF1-215ENST00000482693 FGF6P10767 208 aa11.17□□□□□ -0.62
SF1-215ENST00000482693 FAT2Q9NYQ8 4349 aa11.17□□□□□ -0.62
SF1-215ENST00000482693 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 A0A087WTM6 91 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 REG3AQ06141 175 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 RNASEKQ6P5S7 137 aaKnown RBP11.16□□□□□ -0.62
SF1-215ENST00000482693 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
SF1-215ENST00000482693 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 C1orf43Q9BWL3 253 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 MAP1LC3AQ9H492 121 aa11.16□□□□□ -0.62
SF1-215ENST00000482693 TGIF2-C20orf24A0A0A6YYL0 155 aa11.15□□□□□ -0.62
SF1-215ENST00000482693 RAB5AP20339 215 aa11.15□□□□□ -0.62
SF1-215ENST00000482693 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
SF1-215ENST00000482693 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
SF1-215ENST00000482693 OR5A1Q8NGJ0 315 aa11.14□□□□□ -0.63
SF1-215ENST00000482693 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 KIAA1644Q3SXP7 199 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 Q8N8P6 123 aa11.13□□□□□ -0.63
SF1-215ENST00000482693 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
SF1-215ENST00000482693 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
SF1-215ENST00000482693 SMCO4Q9NRQ5 59 aa11.12□□□□□ -0.63
SF1-215ENST00000482693 CSDC2Q9Y534 153 aaKnown RBP11.12□□□□□ -0.63
SF1-215ENST00000482693 K7EMI3 77 aa11.11□□□□□ -0.63
SF1-215ENST00000482693 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
SF1-215ENST00000482693 SPATA12Q7Z6I5 190 aa11.11□□□□□ -0.63
SF1-215ENST00000482693 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
SF1-215ENST00000482693 ALKBH7Q9BT30 221 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms