RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 C20orf203Q8NBC4 194 aa10.74□□□□□ -0.69
PHF1-207ENST00000479029 UBE2L6O14933 153 aa10.73□□□□□ -0.69
PHF1-207ENST00000479029 CTRLP40313 264 aa10.73□□□□□ -0.69
PHF1-207ENST00000479029 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
PHF1-207ENST00000479029 COTL1Q14019 142 aa10.72□□□□□ -0.69
PHF1-207ENST00000479029 CNFNQ9BYD5 112 aa10.72□□□□□ -0.69
PHF1-207ENST00000479029 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
PHF1-207ENST00000479029 AMTP48728 403 aa10.71□□□□□ -0.69
PHF1-207ENST00000479029 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
PHF1-207ENST00000479029 OCC1Q8TAD7 63 aa10.71□□□□□ -0.69
PHF1-207ENST00000479029 hDV102S1A0JD36 115 aa10.7□□□□□ -0.7
PHF1-207ENST00000479029 RPL37AP61513 92 aaKnown RBP10.7□□□□□ -0.7
PHF1-207ENST00000479029 CNBPP62633 177 aaKnown RBP10.7□□□□□ -0.7
PHF1-207ENST00000479029 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
PHF1-207ENST00000479029 RNASE7Q9H1E1 156 aaKnown RBP10.7□□□□□ -0.7
PHF1-207ENST00000479029 K7EN84 100 aa10.69□□□□□ -0.7
PHF1-207ENST00000479029 OXTP01178 125 aa10.69□□□□□ -0.7
PHF1-207ENST00000479029 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
PHF1-207ENST00000479029 GATD1Q8NB37 220 aa10.69□□□□□ -0.7
PHF1-207ENST00000479029 AP5S1Q9NUS5 200 aa10.69□□□□□ -0.7
PHF1-207ENST00000479029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
PHF1-207ENST00000479029 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
PHF1-207ENST00000479029 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
PHF1-207ENST00000479029 TEX261Q6UWH6 196 aa10.67□□□□□ -0.7
PHF1-207ENST00000479029 GTSF1Q8WW33 167 aa10.67□□□□□ -0.7
PHF1-207ENST00000479029 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
PHF1-207ENST00000479029 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
PHF1-207ENST00000479029 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
PHF1-207ENST00000479029 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 PANO1I0J062 215 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 NCR2O95944 276 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 BLOC1S1P78537 153 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 AMMECR1LQ6DCA0 310 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 CFAP161Q6P656 301 aa10.65□□□□□ -0.7
PHF1-207ENST00000479029 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
PHF1-207ENST00000479029 A8MWL6 223 aa10.64□□□□□ -0.71
PHF1-207ENST00000479029 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
PHF1-207ENST00000479029 FOXA3P55318 350 aaPredicted RBP10.64□□□□□ -0.71
PHF1-207ENST00000479029 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
PHF1-207ENST00000479029 RPL39LQ96EH5 51 aaKnown RBP10.64□□□□□ -0.71
PHF1-207ENST00000479029 GAGE12HA6NDE8 117 aa10.63□□□□□ -0.71
PHF1-207ENST00000479029 H7C423 109 aa10.63□□□□□ -0.71
PHF1-207ENST00000479029 SLPIP03973 132 aa10.63□□□□□ -0.71
PHF1-207ENST00000479029 CIRBPQ14011 172 aaKnown RBP10.63□□□□□ -0.71
PHF1-207ENST00000479029 ALKAL2Q6UX46 152 aa10.63□□□□□ -0.71
PHF1-207ENST00000479029 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
PHF1-207ENST00000479029 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
PHF1-207ENST00000479029 APCSP02743 223 aa10.62□□□□□ -0.71
PHF1-207ENST00000479029 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
PHF1-207ENST00000479029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
PHF1-207ENST00000479029 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
PHF1-207ENST00000479029 CEBPGP53567 150 aa10.61□□□□□ -0.71
PHF1-207ENST00000479029 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
PHF1-207ENST00000479029 BORCS7Q96B45 105 aa10.61□□□□□ -0.71
PHF1-207ENST00000479029 RNF185Q96GF1 192 aa10.61□□□□□ -0.71
PHF1-207ENST00000479029 I3L3M4 83 aa10.6□□□□□ -0.71
PHF1-207ENST00000479029 FGF6P10767 208 aa10.6□□□□□ -0.71
PHF1-207ENST00000479029 PMCHP20382 165 aa10.6□□□□□ -0.71
PHF1-207ENST00000479029 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
PHF1-207ENST00000479029 CT83Q5H943 113 aa10.6□□□□□ -0.71
PHF1-207ENST00000479029 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
PHF1-207ENST00000479029 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
PHF1-207ENST00000479029 A0A087WYN8 130 aa10.59□□□□□ -0.71
PHF1-207ENST00000479029 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
PHF1-207ENST00000479029 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
PHF1-207ENST00000479029 SPACA4Q8TDM5 124 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 TMEM101Q96IK0 257 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 BTF3L4Q96K17 158 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 EIF5A2Q9GZV4 153 aaKnown RBP10.58□□□□□ -0.72
PHF1-207ENST00000479029 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
PHF1-207ENST00000479029 A0A1B0GUT8 65 aa10.57□□□□□ -0.72
PHF1-207ENST00000479029 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
PHF1-207ENST00000479029 FAM210AQ96ND0 272 aa10.57□□□□□ -0.72
PHF1-207ENST00000479029 SMIM7Q9BQ49 75 aa10.57□□□□□ -0.72
PHF1-207ENST00000479029 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
PHF1-207ENST00000479029 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
PHF1-207ENST00000479029 HIGD1CA8MV81 97 aa10.56□□□□□ -0.72
PHF1-207ENST00000479029 COX6A2Q02221 97 aa10.56□□□□□ -0.72
PHF1-207ENST00000479029 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
PHF1-207ENST00000479029 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
PHF1-207ENST00000479029 GVQW2A0A096LPI5 108 aaPredicted RBP10.55□□□□□ -0.72
PHF1-207ENST00000479029 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
PHF1-207ENST00000479029 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
PHF1-207ENST00000479029 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
PHF1-207ENST00000479029 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 ZNF727A8MUV8 499 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 NDUFS6O75380 124 aaKnown RBP10.54□□□□□ -0.72
PHF1-207ENST00000479029 GAS8-AS1O95177 125 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 TSHBP01222 138 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 ESDP10768 282 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 XCL1P47992 114 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 FOXI1Q12951 378 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 Q6ZRU5 148 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
PHF1-207ENST00000479029 PRSS3P2Q8NHM4 247 aa10.53□□□□□ -0.72
PHF1-207ENST00000479029 C7orf33Q8WU49 177 aa10.53□□□□□ -0.72
PHF1-207ENST00000479029 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms