RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 MRPL18Q9H0U6 180 aaKnown RBP9.94□□□□□ -0.82
USP11-207ENST00000478596 M0QY20 66 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 PPP1R17O96001 155 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 FABP9Q0Z7S8 132 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 ORMDL3Q8N138 153 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 NEXN-AS1Q8NBZ9 246 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 TRAPPC1Q9Y5R8 145 aa9.93□□□□□ -0.82
USP11-207ENST00000478596 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 PPBPP02775 128 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 ST20Q9HBF5 79 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 NIT2Q9NQR4 276 aa9.92□□□□□ -0.82
USP11-207ENST00000478596 RPS10P46783 165 aaKnown RBP9.91□□□□□ -0.82
USP11-207ENST00000478596 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
USP11-207ENST00000478596 TTC32Q5I0X7 151 aa9.91□□□□□ -0.82
USP11-207ENST00000478596 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
USP11-207ENST00000478596 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.82
USP11-207ENST00000478596 CCL18P55774 89 aa9.9□□□□□ -0.82
USP11-207ENST00000478596 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
USP11-207ENST00000478596 YPEL4Q96NS1 127 aa9.89□□□□□ -0.83
USP11-207ENST00000478596 MAP1LC3AQ9H492 121 aa9.89□□□□□ -0.83
USP11-207ENST00000478596 SDHAF1A6NFY7 115 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 GAS8-AS1O95177 125 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 NPYP01303 97 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 RAB5AP20339 215 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 KRTAP10-1P60331 282 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 UBE2D3P61077 147 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 UBE2D2P62837 147 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
USP11-207ENST00000478596 Q9H8V8 135 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
USP11-207ENST00000478596 Q9UF83 564 aa9.88□□□□□ -0.83
USP11-207ENST00000478596 LRP1Q07954 4544 aaKnown RBP9.87□□□□□ -0.83
USP11-207ENST00000478596 PMCHP20382 165 aa9.87□□□□□ -0.83
USP11-207ENST00000478596 FCER1GP30273 86 aa9.87□□□□□ -0.83
USP11-207ENST00000478596 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
USP11-207ENST00000478596 COTL1Q14019 142 aa9.87□□□□□ -0.83
USP11-207ENST00000478596 LAMTOR2Q9Y2Q5 125 aa9.87□□□□□ -0.83
USP11-207ENST00000478596 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP11-207ENST00000478596 TMEM97Q5BJF2 176 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 NRACQ8N912 160 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 GTSF1LQ9H1H1 148 aa9.86□□□□□ -0.83
USP11-207ENST00000478596 TRAV8-6A0A0B4J262 113 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 PHOX2AO14813 284 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 AMTP48728 403 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
USP11-207ENST00000478596 TRBV25-1A0A075B6N4 114 aa9.84□□□□□ -0.83
USP11-207ENST00000478596 COLCA2A8K830 154 aa9.84□□□□□ -0.83
USP11-207ENST00000478596 I3L3M4 83 aa9.84□□□□□ -0.83
USP11-207ENST00000478596 EREGO14944 169 aa9.84□□□□□ -0.83
USP11-207ENST00000478596 IGHV1-24A0A0C4DH33 117 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 VCYO14598 125 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 UBE2L6O14933 153 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 TRGC2P03986 189 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 ESRGQ1W209 222 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
USP11-207ENST00000478596 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
USP11-207ENST00000478596 LELP1Q5T871 98 aa9.82□□□□□ -0.84
USP11-207ENST00000478596 PRSS3P2Q8NHM4 247 aa9.82□□□□□ -0.84
USP11-207ENST00000478596 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
USP11-207ENST00000478596 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
USP11-207ENST00000478596 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
USP11-207ENST00000478596 TCAPO15273 167 aa9.81□□□□□ -0.84
USP11-207ENST00000478596 FA2HQ7L5A8 372 aa9.81□□□□□ -0.84
USP11-207ENST00000478596 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
USP11-207ENST00000478596 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
USP11-207ENST00000478596 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
USP11-207ENST00000478596 TIRAPP58753 221 aa9.8□□□□□ -0.84
USP11-207ENST00000478596 IQCJQ1A5X6 159 aa9.8□□□□□ -0.84
USP11-207ENST00000478596 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
USP11-207ENST00000478596 TMEM262E9PQX1 116 aa9.79□□□□□ -0.84
USP11-207ENST00000478596 TSHBP01222 138 aa9.79□□□□□ -0.84
USP11-207ENST00000478596 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
USP11-207ENST00000478596 PKIAP61925 76 aa9.79□□□□□ -0.84
USP11-207ENST00000478596 RPL32P62910 135 aaKnown RBP9.79□□□□□ -0.84
USP11-207ENST00000478596 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
USP11-207ENST00000478596 WFDC10BQ8IUB3 73 aa9.79□□□□□ -0.84
USP11-207ENST00000478596 A0A087WX48 190 aa9.78□□□□□ -0.84
USP11-207ENST00000478596 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
USP11-207ENST00000478596 HAMPP81172 84 aa9.78□□□□□ -0.84
USP11-207ENST00000478596 AMMECR1LQ6DCA0 310 aa9.78□□□□□ -0.84
USP11-207ENST00000478596 Q8N8P6 123 aa9.78□□□□□ -0.84
USP11-207ENST00000478596 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.84
USP11-207ENST00000478596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.77□□□□□ -0.85
USP11-207ENST00000478596 IGKV2-29A2NJV5 120 aaPredicted RBP9.77□□□□□ -0.85
USP11-207ENST00000478596 C1orf196B1AJZ1 125 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms