RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 Q8N3U1 123 aa18.07■□□□□ 0.48
CCM2-211ENST00000478582 URGCP-MRPS24S4R325 110 aa18.07■□□□□ 0.48
CCM2-211ENST00000478582 TRBV24-1A0A075B6N3 115 aa18.06■□□□□ 0.48
CCM2-211ENST00000478582 I3L3M4 83 aa18.06■□□□□ 0.48
CCM2-211ENST00000478582 CHCHD5Q9BSY4 110 aa18.06■□□□□ 0.48
CCM2-211ENST00000478582 A0A087WX48 190 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 TRBV27A0A0K0K1C4 114 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 D6R8Y8 96 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 PMCHP20382 165 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 SUMO2P61956 95 aaKnown RBP18.04■□□□□ 0.48
CCM2-211ENST00000478582 LAGE3Q14657 143 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 NFE4Q86UQ8 179 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 C20orf78Q9BR46 151 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 TMEM243Q9BU79 118 aa18.04■□□□□ 0.48
CCM2-211ENST00000478582 TMEM262E9PQX1 116 aa18.03■□□□□ 0.48
CCM2-211ENST00000478582 PHOX2AO14813 284 aa18.03■□□□□ 0.48
CCM2-211ENST00000478582 VCYO14598 125 aa18.02■□□□□ 0.48
CCM2-211ENST00000478582 AMTP48728 403 aa18.02■□□□□ 0.48
CCM2-211ENST00000478582 RPL32P62910 135 aaKnown RBP18.02■□□□□ 0.48
CCM2-211ENST00000478582 TMEM136Q6ZRR5 245 aa18.02■□□□□ 0.48
CCM2-211ENST00000478582 DEFB104AQ8WTQ1 72 aa18.02■□□□□ 0.48
CCM2-211ENST00000478582 TNFRSF6BO95407 300 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 TNP2Q05952 138 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 ELOBQ15370 118 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 ATRAIDQ6UW56 229 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 Q6ZRN7 208 aaPredicted RBP18.01■□□□□ 0.47
CCM2-211ENST00000478582 ORMDL3Q8N138 153 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 KRTAP17-1Q9BYP8 105 aa18.01■□□□□ 0.47
CCM2-211ENST00000478582 MPV17L2Q567V2 206 aa18■□□□□ 0.47
CCM2-211ENST00000478582 PKD1P98161 4303 aa18■□□□□ 0.47
CCM2-211ENST00000478582 TSHBP01222 138 aa17.99■□□□□ 0.47
CCM2-211ENST00000478582 GAGE6Q13070 117 aa17.99■□□□□ 0.47
CCM2-211ENST00000478582 APCSP02743 223 aa17.98■□□□□ 0.47
CCM2-211ENST00000478582 COX19Q49B96 90 aa17.98■□□□□ 0.47
CCM2-211ENST00000478582 GNB1LQ9BYB4 327 aa17.98■□□□□ 0.47
CCM2-211ENST00000478582 LAMTOR2Q9Y2Q5 125 aa17.98■□□□□ 0.47
CCM2-211ENST00000478582 NPYP01303 97 aa17.97■□□□□ 0.47
CCM2-211ENST00000478582 PRELID3AQ96N28 172 aa17.97■□□□□ 0.47
CCM2-211ENST00000478582 KLK12Q9UKR0 248 aa17.97■□□□□ 0.47
CCM2-211ENST00000478582 TRAV8-3A0A0A6YYJ7 113 aa17.96■□□□□ 0.47
CCM2-211ENST00000478582 A0A1B0GUV1 79 aa17.96■□□□□ 0.47
CCM2-211ENST00000478582 H7C423 109 aa17.96■□□□□ 0.47
CCM2-211ENST00000478582 HLA-DQA1P01909 254 aa17.96■□□□□ 0.47
CCM2-211ENST00000478582 RBX1P62877 108 aa17.96■□□□□ 0.47
CCM2-211ENST00000478582 PKHD1P08F94 4074 aa17.95■□□□□ 0.46
CCM2-211ENST00000478582 UBE2L6O14933 153 aa17.95■□□□□ 0.46
CCM2-211ENST00000478582 ESDP10768 282 aa17.95■□□□□ 0.46
CCM2-211ENST00000478582 Q8N976 141 aa17.95■□□□□ 0.46
CCM2-211ENST00000478582 PRSS47A8MTI9 375 aa17.94■□□□□ 0.46
CCM2-211ENST00000478582 KIR2DL4Q99706 377 aa17.94■□□□□ 0.46
CCM2-211ENST00000478582 SMIM2Q9BVW6 85 aa17.94■□□□□ 0.46
CCM2-211ENST00000478582 Q9HAA7 133 aa17.92■□□□□ 0.46
CCM2-211ENST00000478582 DNAH11Q96DT5 4516 aa17.91■□□□□ 0.46
CCM2-211ENST00000478582 DYNC1H1Q14204 4646 aaKnown RBP17.91■□□□□ 0.46
CCM2-211ENST00000478582 TCAPO15273 167 aa17.91■□□□□ 0.46
CCM2-211ENST00000478582 MT-ND6P03923 174 aa17.91■□□□□ 0.46
CCM2-211ENST00000478582 ANGP03950 147 aaKnown RBP17.91■□□□□ 0.46
CCM2-211ENST00000478582 FCER1GP30273 86 aa17.91■□□□□ 0.46
CCM2-211ENST00000478582 Q0VG73 95 aa17.91■□□□□ 0.46
CCM2-211ENST00000478582 TGIF2-C20orf24A0A0A6YYL0 155 aa17.9■□□□□ 0.46
CCM2-211ENST00000478582 C20orf203Q8NBC4 194 aa17.9■□□□□ 0.46
CCM2-211ENST00000478582 PRR34Q9NV39 138 aa17.9■□□□□ 0.46
CCM2-211ENST00000478582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.89■□□□□ 0.45
CCM2-211ENST00000478582 IGKV2-29A2NJV5 120 aaPredicted RBP17.89■□□□□ 0.45
CCM2-211ENST00000478582 ENHOQ6UWT2 76 aa17.89■□□□□ 0.45
CCM2-211ENST00000478582 UBE2WQ96B02 151 aa17.89■□□□□ 0.45
CCM2-211ENST00000478582 TM2D2Q9BX73 214 aa17.89■□□□□ 0.45
CCM2-211ENST00000478582 HERC2O95714 4834 aa17.89■□□□□ 0.45
CCM2-211ENST00000478582 IGLV4-60A0A075B6I1 120 aa17.88■□□□□ 0.45
CCM2-211ENST00000478582 YPEL4Q96NS1 127 aa17.88■□□□□ 0.45
CCM2-211ENST00000478582 KIAA1109Q2LD37 5005 aa17.87■□□□□ 0.45
CCM2-211ENST00000478582 FGF6P10767 208 aa17.87■□□□□ 0.45
CCM2-211ENST00000478582 RMI2Q96E14 147 aa17.87■□□□□ 0.45
CCM2-211ENST00000478582 MAP1LC3AQ9H492 121 aa17.87■□□□□ 0.45
CCM2-211ENST00000478582 COX11Q9Y6N1 276 aa17.87■□□□□ 0.45
CCM2-211ENST00000478582 CRPP02741 224 aa17.86■□□□□ 0.45
CCM2-211ENST00000478582 ZNF25P17030 456 aaPredicted RBP17.86■□□□□ 0.45
CCM2-211ENST00000478582 KIAA1644Q3SXP7 199 aa17.86■□□□□ 0.45
CCM2-211ENST00000478582 AMMECR1LQ6DCA0 310 aa17.86■□□□□ 0.45
CCM2-211ENST00000478582 LINC00269Q8N2A0 174 aa17.86■□□□□ 0.45
CCM2-211ENST00000478582 MIAQ16674 131 aa17.85■□□□□ 0.45
CCM2-211ENST00000478582 MRPL52Q86TS9 123 aaKnown RBP17.85■□□□□ 0.45
CCM2-211ENST00000478582 SMCO4Q9NRQ5 59 aa17.85■□□□□ 0.45
CCM2-211ENST00000478582 MRPL18Q9H0U6 180 aaKnown RBP17.84■□□□□ 0.45
CCM2-211ENST00000478582 PSCAO43653 123 aa17.83■□□□□ 0.44
CCM2-211ENST00000478582 LOC389332A0A1B0GUA5 103 aa17.82■□□□□ 0.44
CCM2-211ENST00000478582 REG3AQ06141 175 aa17.82■□□□□ 0.44
CCM2-211ENST00000478582 RNASEKQ6P5S7 137 aaKnown RBP17.82■□□□□ 0.44
CCM2-211ENST00000478582 Q8N8P6 123 aa17.82■□□□□ 0.44
CCM2-211ENST00000478582 C16orf90A8MZG2 172 aa17.81■□□□□ 0.44
CCM2-211ENST00000478582 FABP9Q0Z7S8 132 aa17.81■□□□□ 0.44
CCM2-211ENST00000478582 TMEM18Q96B42 140 aa17.81■□□□□ 0.44
CCM2-211ENST00000478582 ALKBH7Q9BT30 221 aaPredicted RBP17.81■□□□□ 0.44
CCM2-211ENST00000478582 IGKV2D-24A0A075B6R9 120 aa17.8■□□□□ 0.44
CCM2-211ENST00000478582 RAB5AP20339 215 aa17.8■□□□□ 0.44
CCM2-211ENST00000478582 SMAGPQ0VAQ4 97 aa17.8■□□□□ 0.44
CCM2-211ENST00000478582 CBLN2Q8IUK8 224 aa17.8■□□□□ 0.44
CCM2-211ENST00000478582 TMEM101Q96IK0 257 aa17.8■□□□□ 0.44
CCM2-211ENST00000478582 CSDC2Q9Y534 153 aaKnown RBP17.8■□□□□ 0.44
CCM2-211ENST00000478582 A0A087WTM6 91 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms