RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 C11orf52Q96A22 123 aa7.46□□□□□ -1.22
CPSF7-211ENST00000477890 RNF185Q96GF1 192 aa7.46□□□□□ -1.22
CPSF7-211ENST00000477890 GNG13Q9P2W3 67 aa7.46□□□□□ -1.22
CPSF7-211ENST00000477890 BCL2L11O43521 198 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 TRGC1P0CF51 173 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 AMTP48728 403 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 SULT1A2P50226 295 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 CCL20P78556 96 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 MANBALQ9NQG1 85 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 NIT2Q9NQR4 276 aa7.45□□□□□ -1.22
CPSF7-211ENST00000477890 TMA7Q9Y2S6 64 aaKnown RBP7.45□□□□□ -1.22
CPSF7-211ENST00000477890 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 RAB19A4D1S5 217 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 C19orf71A6NCJ1 209 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 HMSDA8MTL9 139 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 F2Z2F3 143 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 PHOX2AO14813 284 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 NTF3P20783 257 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 COTL1Q14019 142 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 LYZL1Q6UWQ5 148 aa7.44□□□□□ -1.22
CPSF7-211ENST00000477890 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 GAGE12HA6NDE8 117 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 IFNA1P01562 189 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 GNG4P50150 75 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 EIF5AP63241 154 aaKnown RBP7.43□□□□□ -1.22
CPSF7-211ENST00000477890 COX6A2Q02221 97 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 C7orf33Q8WU49 177 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
CPSF7-211ENST00000477890 LOC105371267A0A1B0GV96 52 aa7.42□□□□□ -1.22
CPSF7-211ENST00000477890 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
CPSF7-211ENST00000477890 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CPSF7-211ENST00000477890 TRAV1-1A0A0B4J248 108 aa7.41□□□□□ -1.22
CPSF7-211ENST00000477890 IGKV2-24A0A0C4DH68 120 aa7.41□□□□□ -1.22
CPSF7-211ENST00000477890 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
CPSF7-211ENST00000477890 MAJINQ3KP22 176 aa7.41□□□□□ -1.22
CPSF7-211ENST00000477890 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
CPSF7-211ENST00000477890 GTSF1Q8WW33 167 aa7.41□□□□□ -1.22
CPSF7-211ENST00000477890 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 TRAV26-2A0A0B4J265 109 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 TEX46H3BTG2 121 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 NDUFS6O75380 124 aaKnown RBP7.4□□□□□ -1.22
CPSF7-211ENST00000477890 MEF2BQ02080 365 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-211ENST00000477890 TWIST1Q15672 202 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 MED9Q9NWA0 146 aa7.4□□□□□ -1.22
CPSF7-211ENST00000477890 LINC00862A6NCI5 91 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 PDE6DO43924 150 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 CTRLP40313 264 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
CPSF7-211ENST00000477890 SLC51BQ86UW2 128 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 STPG4Q8N801 248 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 NUDT10Q8NFP7 164 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-211ENST00000477890 NUDT11Q96G61 164 aa7.39□□□□□ -1.23
CPSF7-211ENST00000477890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-211ENST00000477890 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-211ENST00000477890 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
CPSF7-211ENST00000477890 LYPD6BQ8NI32 183 aa7.38□□□□□ -1.23
CPSF7-211ENST00000477890 RPL39LQ96EH5 51 aaKnown RBP7.38□□□□□ -1.23
CPSF7-211ENST00000477890 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
CPSF7-211ENST00000477890 A0A096LNI7 61 aa7.37□□□□□ -1.23
CPSF7-211ENST00000477890 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-211ENST00000477890 APCSP02743 223 aa7.37□□□□□ -1.23
CPSF7-211ENST00000477890 EIF5AL1Q6IS14 154 aaKnown RBP7.37□□□□□ -1.23
CPSF7-211ENST00000477890 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
CPSF7-211ENST00000477890 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
CPSF7-211ENST00000477890 H7C423 109 aa7.36□□□□□ -1.23
CPSF7-211ENST00000477890 NCR2O95944 276 aa7.36□□□□□ -1.23
CPSF7-211ENST00000477890 BCL2P10415 239 aa7.36□□□□□ -1.23
CPSF7-211ENST00000477890 FGF6P10767 208 aa7.36□□□□□ -1.23
CPSF7-211ENST00000477890 FOXI1Q12951 378 aa7.36□□□□□ -1.23
CPSF7-211ENST00000477890 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
CPSF7-211ENST00000477890 SDHAF1A6NFY7 115 aa7.35□□□□□ -1.23
CPSF7-211ENST00000477890 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-211ENST00000477890 ODF1Q14990 250 aa7.35□□□□□ -1.23
CPSF7-211ENST00000477890 SMIM15Q7Z3B0 74 aa7.35□□□□□ -1.23
CPSF7-211ENST00000477890 K7EN84 100 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 XCL1P47992 114 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 RAB14P61106 215 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 OCC1Q8TAD7 63 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 LINC00526Q96FQ7 95 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 BTF3L4Q96K17 158 aa7.34□□□□□ -1.23
CPSF7-211ENST00000477890 CCL25O15444 150 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 ZNF25P17030 456 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-211ENST00000477890 PMCHP20382 165 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 CLLU1Q5K131 121 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 CARD19Q96LW7 228 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 LINC00474Q9P2X8 69 aa7.33□□□□□ -1.24
CPSF7-211ENST00000477890 TNXBP22105 4242 aa7.32□□□□□ -1.24
CPSF7-211ENST00000477890 IGHV1-58A0A0C4DH39 117 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms