RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CCL13Q99616 98 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 ESM1Q9NQ30 184 aa4.32□□□□□ -1.72
ECHDC1-215ENST00000475319 TRAV23DV6A0A075B6W5 121 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 J3QKU1 62 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 FSTL3O95633 263 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 TRBV12-3P01733 135 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 STATHP02808 62 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 DEFB134Q4QY38 66 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 C10orf128Q5T292 105 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 TMEM61Q8N0U2 210 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 RMI2Q96E14 147 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 TMEM141Q96I45 108 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 OBSCN-AS1Q96MR7 158 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 CABIN1Q9Y6J0 2220 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 ZFYVE26Q68DK2 2539 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 ADAMTS9Q9P2N4 1935 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 LOC100131303A0A0U1RQF7 123 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 M0R1W7 72 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 SOCS3O14543 225 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 PPP1R17O96001 155 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 RNASE4P34096 147 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 IGLV3-21P80748 117 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 CLEC19AQ6UXS0 136 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 KLF14Q8TD94 323 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 TMEM14BQ9NUH8 114 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
ECHDC1-215ENST00000475319 ASXL3Q9C0F0 2248 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 APC2O95996 2303 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 TNRC6BQ9UPQ9 1833 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 IGLV4-69A0A075B6H9 119 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 IGKV1OR2-108A0A075B7D4 117 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 A6NN06 94 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 CCL4P13236 92 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 PRCDQ00LT1 54 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 MIAQ16674 131 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 FAM19A3Q7Z5A8 133 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 Q8N6K4 173 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 DCHS1Q96JQ0 3298 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 FRYLO94915 3013 aa4.3□□□□□ -1.72
ECHDC1-215ENST00000475319 HEATR5BQ9P2D3 2071 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 FREM3P0C091 2139 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 KNL1Q8NG31 2342 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 MYO15AQ9UKN7 3530 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 TANC2Q9HCD6 1990 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 MPDZO75970 2070 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 SNRNP200O75643 2136 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
ECHDC1-215ENST00000475319 DYSFO75923 2080 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 SHANK1Q9Y566 2161 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 IGHV1-45A0A0A0MS14 117 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 IGHV5-10-1A0A0J9YXX1 117 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 hDV103S1A0JD37 113 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 S100A4P26447 101 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 MP68P56378 58 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 RPS21P63220 83 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 SYCNQ0VAF6 134 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 CYP4F30PQ9H0H9 118 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
ECHDC1-215ENST00000475319 A0A087WZ39 114 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 NTN3O00634 580 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 PLA2G2AP14555 144 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 CRIP1P50238 77 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 NNATQ16517 81 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 IGFL3Q6UXB1 125 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 Q6ZRP5 223 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 COX14Q96I36 57 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
ECHDC1-215ENST00000475319 BUB1B-PAK6H3BSN5 160 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 LINC00205P59089 165 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 PDE6HQ13956 83 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 FAM27BQ5VT28 67 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 ZNF833PQ6ZTB9 187 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 GPHB5Q86YW7 130 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 HEATR1Q9H583 2144 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 IGHV4OR15-8A0A075B7B6 117 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 ERHP84090 104 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms