RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 DERL1Q9BUN8 251 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 GFRA4Q9GZZ7 299 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 IGKV2-24A0A0C4DH68 120 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 FAM74A7A6NL05 159 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 NDUFS6O75380 124 aaKnown RBP3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 LTAP01374 205 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 MBP02144 154 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 GZMBP10144 247 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 ATP6V0CP27449 155 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 UBE2G2P60604 165 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 CTAG1AP78358 180 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 SERF2P84101 59 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 SRSF9Q13242 221 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 ZNF726P1Q15940 193 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 STPG4Q8N801 248 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 LYPD6BQ8NI32 183 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 ENKURQ8TC29 256 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 ACTR3CQ9C0K3 210 aaPredicted RBP3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
SNRNP40-204ENST00000474025 A0A096LNI7 61 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 IGHV1-24A0A0C4DH33 117 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 HSBP1L1C9JCN9 74 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 SNAI2O43623 268 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 SSNA1O43805 119 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 CXCL1P09341 107 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 TAGLN2P37802 199 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 RAB5CP51148 216 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 INO80EQ8NBZ0 244 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 FMC1Q96HJ9 113 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 ZNF471Q9BX82 626 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 NKX6-2Q9C056 277 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 TNFSF18Q9UNG2 199 aa3.17□□□□□ -1.9
SNRNP40-204ENST00000474025 GVQW2A0A096LPI5 108 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 CTXND1A0A1B0GTU2 59 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 GAGE12HA6NDE8 117 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 C5orf52A6NGY3 159 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 M0QY20 66 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 OR5AL1P0C617 328 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 VPREB1P12018 145 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 DEFA3P59666 94 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 UBE2G1P62253 170 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 SPANXN1Q5VSR9 72 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 Q6ZRP5 223 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 AQP10Q96PS8 301 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 MARVELD1Q9BSK0 173 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 TMEM243Q9BU79 118 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 VCX2Q9H322 139 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 LINC00474Q9P2X8 69 aa3.16□□□□□ -1.9
SNRNP40-204ENST00000474025 H7C1H1 209 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 UPK1BO75841 260 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 SMIM17P0DL12 118 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 SULT1A2P50226 295 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 SSTP61278 116 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 IFITM3Q01628 133 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 SUMO4Q6EEV6 95 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 TCEAL7Q9BRU2 100 aa3.15□□□□□ -1.91
SNRNP40-204ENST00000474025 FAM231BA6NCW3 169 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 AKR1C3P42330 323 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 FHITP49789 147 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 NKX2-5P52952 324 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 RPL7L1Q6DKI1 246 aaKnown RBP3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 LINC00299Q6ZSB3 139 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 OCC1Q8TAD7 63 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 S100ZQ8WXG8 99 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 CHCHD10Q8WYQ3 142 aaPredicted RBP3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 MLST8Q9BVC4 326 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 MED28Q9H204 178 aa3.14□□□□□ -1.91
SNRNP40-204ENST00000474025 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 MAP1LC3B2A6NCE7 125 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 PRYO14603 147 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 UBE2L6O14933 153 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 MGPP08493 103 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 AMTP48728 403 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 FOXI1Q12951 378 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 COTL1Q14019 142 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 ZNF664Q8N3J9 261 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 STOML3Q8TAV4 291 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 LINC00526Q96FQ7 95 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 CARD19Q96LW7 228 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 MAP1LC3BQ9GZQ8 125 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 PSORS1C2Q9UIG4 136 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
SNRNP40-204ENST00000474025 IGLC6P0CF74 106 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 Q5BKY6 102 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 AKR1C8PQ5T2L2 129 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 BAGE2Q86Y30 109 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 NIT2Q9NQR4 276 aa3.12□□□□□ -1.91
SNRNP40-204ENST00000474025 NDUFA13Q9P0J0 144 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms