RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 KRTAP1-5Q9BYS1 174 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 KMT2AQ03164 3969 aa13.54□□□□□ -0.24
SF1-213ENST00000472725 AMTP48728 403 aa13.54□□□□□ -0.24
SF1-213ENST00000472725 LAGE3Q14657 143 aa13.54□□□□□ -0.24
SF1-213ENST00000472725 C6orf223Q8N319 242 aa13.54□□□□□ -0.24
SF1-213ENST00000472725 PRELID3AQ96N28 172 aa13.54□□□□□ -0.24
SF1-213ENST00000472725 DNAH6Q9C0G6 4158 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 IBA57-AS1B1ANH7 110 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 H7C423 109 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 APCSP02743 223 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 NFE4Q86UQ8 179 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 KIR2DL4Q99706 377 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 SMCO4Q9NRQ5 59 aa13.53□□□□□ -0.24
SF1-213ENST00000472725 PRSS47A8MTI9 375 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 TMEM262E9PQX1 116 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 IGHV3-30P01768 117 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 IGHV3-33P01772 117 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 ATRAIDQ6UW56 229 aa13.52□□□□□ -0.25
SF1-213ENST00000472725 NPYP01303 97 aa13.51□□□□□ -0.25
SF1-213ENST00000472725 LINC00336Q6ZUF6 198 aa13.51□□□□□ -0.25
SF1-213ENST00000472725 A0A1B0GUV1 79 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 UBE2L6O14933 153 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 TSHBP01222 138 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 HYDINQ4G0P3 5121 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 RYR2Q92736 4967 aa13.5□□□□□ -0.25
SF1-213ENST00000472725 TGIF2-C20orf24A0A0A6YYL0 155 aa13.49□□□□□ -0.25
SF1-213ENST00000472725 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
SF1-213ENST00000472725 ESDP10768 282 aa13.48□□□□□ -0.25
SF1-213ENST00000472725 FCER1GP30273 86 aa13.48□□□□□ -0.25
SF1-213ENST00000472725 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
SF1-213ENST00000472725 MAP1LC3AQ9H492 121 aa13.48□□□□□ -0.25
SF1-213ENST00000472725 RTL8CO15255 209 aa13.47□□□□□ -0.25
SF1-213ENST00000472725 GAGE6Q13070 117 aa13.47□□□□□ -0.25
SF1-213ENST00000472725 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
SF1-213ENST00000472725 RBX1P62877 108 aa13.46□□□□□ -0.25
SF1-213ENST00000472725 SMAGPQ0VAQ4 97 aa13.46□□□□□ -0.25
SF1-213ENST00000472725 Q0VG73 95 aa13.46□□□□□ -0.25
SF1-213ENST00000472725 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.25
SF1-213ENST00000472725 K7EMI3 77 aa13.45□□□□□ -0.26
SF1-213ENST00000472725 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
SF1-213ENST00000472725 Q8N3U1 123 aa13.45□□□□□ -0.26
SF1-213ENST00000472725 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
SF1-213ENST00000472725 KLK12Q9UKR0 248 aa13.45□□□□□ -0.26
SF1-213ENST00000472725 FABP9Q0Z7S8 132 aa13.44□□□□□ -0.26
SF1-213ENST00000472725 DEFB104AQ8WTQ1 72 aa13.44□□□□□ -0.26
SF1-213ENST00000472725 NXT2Q9NPJ8 142 aaKnown RBP13.44□□□□□ -0.26
SF1-213ENST00000472725 TRAPPC1Q9Y5R8 145 aa13.44□□□□□ -0.26
SF1-213ENST00000472725 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
SF1-213ENST00000472725 RAB5AP20339 215 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
SF1-213ENST00000472725 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 Q8N8P6 123 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 RMI2Q96E14 147 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 COX11Q9Y6N1 276 aa13.43□□□□□ -0.26
SF1-213ENST00000472725 KIAA1644Q3SXP7 199 aa13.42□□□□□ -0.26
SF1-213ENST00000472725 MRPL52Q86TS9 123 aaKnown RBP13.42□□□□□ -0.26
SF1-213ENST00000472725 Q8N976 141 aa13.42□□□□□ -0.26
SF1-213ENST00000472725 ALKBH7Q9BT30 221 aaPredicted RBP13.42□□□□□ -0.26
SF1-213ENST00000472725 PRR34Q9NV39 138 aa13.42□□□□□ -0.26
SF1-213ENST00000472725 RYR3Q15413 4870 aa13.41□□□□□ -0.26
SF1-213ENST00000472725 CRPP02741 224 aa13.41□□□□□ -0.26
SF1-213ENST00000472725 FGF6P10767 208 aa13.41□□□□□ -0.26
SF1-213ENST00000472725 CSDC2Q9Y534 153 aaKnown RBP13.41□□□□□ -0.26
SF1-213ENST00000472725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.4□□□□□ -0.26
SF1-213ENST00000472725 IGKV2-29A2NJV5 120 aaPredicted RBP13.4□□□□□ -0.26
SF1-213ENST00000472725 PRSS29PA6NIE9 313 aa13.4□□□□□ -0.26
SF1-213ENST00000472725 MIAQ16674 131 aa13.4□□□□□ -0.26
SF1-213ENST00000472725 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
SF1-213ENST00000472725 UBE2WQ96B02 151 aa13.4□□□□□ -0.26
SF1-213ENST00000472725 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
SF1-213ENST00000472725 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
SF1-213ENST00000472725 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
SF1-213ENST00000472725 Q9HAA7 133 aa13.39□□□□□ -0.27
SF1-213ENST00000472725 IGLV4-60A0A075B6I1 120 aa13.38□□□□□ -0.27
SF1-213ENST00000472725 G0S2P27469 103 aa13.38□□□□□ -0.27
SF1-213ENST00000472725 ORMDL2Q53FV1 153 aa13.38□□□□□ -0.27
SF1-213ENST00000472725 RNASEKQ6P5S7 137 aaKnown RBP13.38□□□□□ -0.27
SF1-213ENST00000472725 ENHOQ6UWT2 76 aa13.38□□□□□ -0.27
SF1-213ENST00000472725 S100A1P23297 94 aa13.37□□□□□ -0.27
SF1-213ENST00000472725 REG3AQ06141 175 aa13.37□□□□□ -0.27
SF1-213ENST00000472725 LINC00269Q8N2A0 174 aa13.37□□□□□ -0.27
SF1-213ENST00000472725 OR5A1Q8NGJ0 315 aa13.37□□□□□ -0.27
SF1-213ENST00000472725 TRAV8-4A0A0B4J246 113 aa13.36□□□□□ -0.27
SF1-213ENST00000472725 PSCAO43653 123 aa13.35□□□□□ -0.27
SF1-213ENST00000472725 IFI27P40305 119 aaPredicted RBP13.35□□□□□ -0.27
SF1-213ENST00000472725 DGAT2L7PQ6IED9 249 aa13.35□□□□□ -0.27
SF1-213ENST00000472725 PRSS3P2Q8NHM4 247 aa13.35□□□□□ -0.27
SF1-213ENST00000472725 C1orf43Q9BWL3 253 aa13.35□□□□□ -0.27
SF1-213ENST00000472725 UBE2D4Q9Y2X8 147 aa13.35□□□□□ -0.27
SF1-213ENST00000472725 LINC01546A6NGU7 62 aa13.34□□□□□ -0.27
SF1-213ENST00000472725 SPANXA1Q9NS26 97 aa13.34□□□□□ -0.27
SF1-213ENST00000472725 IGKV2D-24A0A075B6R9 120 aa13.33□□□□□ -0.28
SF1-213ENST00000472725 LINC01549A6NIU2 74 aa13.33□□□□□ -0.28
SF1-213ENST00000472725 COLCA2A8K830 154 aa13.33□□□□□ -0.28
SF1-213ENST00000472725 TNP2Q05952 138 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms