RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TMEM262E9PQX1 116 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 K7EMI3 77 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 G0S2P27469 103 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
CCM2-205ENST00000472223 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
CCM2-205ENST00000472223 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
CCM2-205ENST00000472223 UPK3BQ9BT76 320 aa11.6□□□□□ -0.55
CCM2-205ENST00000472223 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
CCM2-205ENST00000472223 A0A087WX48 190 aa11.59□□□□□ -0.55
CCM2-205ENST00000472223 SIVA1O15304 175 aa11.59□□□□□ -0.55
CCM2-205ENST00000472223 IFI27P40305 119 aaPredicted RBP11.59□□□□□ -0.55
CCM2-205ENST00000472223 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
CCM2-205ENST00000472223 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
CCM2-205ENST00000472223 TSHBP01222 138 aa11.58□□□□□ -0.56
CCM2-205ENST00000472223 NTM-AS1Q6ZSK4 140 aa11.58□□□□□ -0.56
CCM2-205ENST00000472223 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
CCM2-205ENST00000472223 Q9H8V8 135 aa11.58□□□□□ -0.56
CCM2-205ENST00000472223 H7C423 109 aa11.57□□□□□ -0.56
CCM2-205ENST00000472223 LAGE3Q14657 143 aa11.57□□□□□ -0.56
CCM2-205ENST00000472223 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
CCM2-205ENST00000472223 C18orf32Q8TCD1 76 aa11.57□□□□□ -0.56
CCM2-205ENST00000472223 LINC00476Q8WZB0 136 aa11.57□□□□□ -0.56
CCM2-205ENST00000472223 LINC00614P0C842 121 aa11.56□□□□□ -0.56
CCM2-205ENST00000472223 STARD9Q9P2P6 4700 aa11.56□□□□□ -0.56
CCM2-205ENST00000472223 GAGE6Q13070 117 aa11.55□□□□□ -0.56
CCM2-205ENST00000472223 WFDC10BQ8IUB3 73 aa11.55□□□□□ -0.56
CCM2-205ENST00000472223 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
CCM2-205ENST00000472223 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
CCM2-205ENST00000472223 AP5S1Q9NUS5 200 aa11.55□□□□□ -0.56
CCM2-205ENST00000472223 IGLV2-18A0A075B6J9 118 aa11.54□□□□□ -0.56
CCM2-205ENST00000472223 K7EP13 123 aa11.54□□□□□ -0.56
CCM2-205ENST00000472223 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
CCM2-205ENST00000472223 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
CCM2-205ENST00000472223 NIT1Q86X76 327 aa11.54□□□□□ -0.56
CCM2-205ENST00000472223 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 ESDP10768 282 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 Q0VG73 95 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 LINC01556Q5JQF7 62 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
CCM2-205ENST00000472223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.52□□□□□ -0.57
CCM2-205ENST00000472223 IGKV2-29A2NJV5 120 aaPredicted RBP11.52□□□□□ -0.57
CCM2-205ENST00000472223 IGHV3-30P01768 117 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 IGHV3-33P01772 117 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 IGHV3-30-5P0DP03 117 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 BTF3P20290 206 aaKnown RBP11.52□□□□□ -0.57
CCM2-205ENST00000472223 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 CHCHD1Q96BP2 118 aaKnown RBP11.52□□□□□ -0.57
CCM2-205ENST00000472223 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.57
CCM2-205ENST00000472223 PLECQ15149 4684 aaKnown RBP11.51□□□□□ -0.57
CCM2-205ENST00000472223 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
CCM2-205ENST00000472223 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
CCM2-205ENST00000472223 HSBP1O75506 76 aa11.5□□□□□ -0.57
CCM2-205ENST00000472223 FGF6P10767 208 aa11.5□□□□□ -0.57
CCM2-205ENST00000472223 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
CCM2-205ENST00000472223 LCE6AA0A183 80 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 LINC01546A6NGU7 62 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 ANGP03950 147 aaKnown RBP11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
CCM2-205ENST00000472223 C2orf66Q6UXQ4 117 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
CCM2-205ENST00000472223 CRPP02741 224 aa11.48□□□□□ -0.57
CCM2-205ENST00000472223 RBX1P62877 108 aa11.48□□□□□ -0.57
CCM2-205ENST00000472223 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
CCM2-205ENST00000472223 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
CCM2-205ENST00000472223 NBDYA0A0U1RRE5 68 aa11.47□□□□□ -0.57
CCM2-205ENST00000472223 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
CCM2-205ENST00000472223 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
CCM2-205ENST00000472223 HBDP02042 147 aa11.46□□□□□ -0.57
CCM2-205ENST00000472223 RPL39P62891 51 aaKnown RBP11.46□□□□□ -0.57
CCM2-205ENST00000472223 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
CCM2-205ENST00000472223 Q8N976 141 aa11.46□□□□□ -0.57
CCM2-205ENST00000472223 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
CCM2-205ENST00000472223 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
CCM2-205ENST00000472223 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
CCM2-205ENST00000472223 SERF1AO75920 110 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 NDUFA6P56556 154 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 Q6ZN92 141 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 TOMM6Q96B49 74 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 SCGB3A1Q96QR1 104 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
CCM2-205ENST00000472223 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
CCM2-205ENST00000472223 M0R2N4 97 aa11.44□□□□□ -0.58
CCM2-205ENST00000472223 S100A6P06703 90 aa11.44□□□□□ -0.58
CCM2-205ENST00000472223 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
CCM2-205ENST00000472223 IBA57-AS1B1ANH7 110 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 NPSP0C0P6 89 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms