RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
SORT1-203ENST00000471996 FHITP49789 147 aa11.63□□□□□ -0.55
SORT1-203ENST00000471996 EIF5AP63241 154 aaKnown RBP11.63□□□□□ -0.55
SORT1-203ENST00000471996 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
SORT1-203ENST00000471996 PKIGQ9Y2B9 76 aa11.63□□□□□ -0.55
SORT1-203ENST00000471996 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
SORT1-203ENST00000471996 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
SORT1-203ENST00000471996 KANTRA0A1W2PQU2 76 aa11.61□□□□□ -0.55
SORT1-203ENST00000471996 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
SORT1-203ENST00000471996 SSTP61278 116 aa11.61□□□□□ -0.55
SORT1-203ENST00000471996 UBE2L6O14933 153 aa11.6□□□□□ -0.55
SORT1-203ENST00000471996 CACNG7P62955 275 aa11.6□□□□□ -0.55
SORT1-203ENST00000471996 PRR26Q8N8Z3 221 aa11.6□□□□□ -0.55
SORT1-203ENST00000471996 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
SORT1-203ENST00000471996 IGKV3OR2-268A0A0C4DH90 116 aa11.59□□□□□ -0.55
SORT1-203ENST00000471996 BCL2L11O43521 198 aa11.59□□□□□ -0.55
SORT1-203ENST00000471996 MBD3L1Q8WWY6 194 aa11.59□□□□□ -0.55
SORT1-203ENST00000471996 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
SORT1-203ENST00000471996 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
SORT1-203ENST00000471996 NKX2-5P52952 324 aaPredicted RBP11.58□□□□□ -0.56
SORT1-203ENST00000471996 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
SORT1-203ENST00000471996 S100A9P06702 114 aaKnown RBP11.56□□□□□ -0.56
SORT1-203ENST00000471996 MGPP08493 103 aa11.56□□□□□ -0.56
SORT1-203ENST00000471996 PRR4Q16378 134 aa11.56□□□□□ -0.56
SORT1-203ENST00000471996 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
SORT1-203ENST00000471996 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
SORT1-203ENST00000471996 PFDN1O60925 122 aa11.55□□□□□ -0.56
SORT1-203ENST00000471996 AKR1C3P42330 323 aa11.55□□□□□ -0.56
SORT1-203ENST00000471996 AMTP48728 403 aa11.55□□□□□ -0.56
SORT1-203ENST00000471996 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
SORT1-203ENST00000471996 MT-ND6P03923 174 aa11.54□□□□□ -0.56
SORT1-203ENST00000471996 FOXI1Q12951 378 aa11.54□□□□□ -0.56
SORT1-203ENST00000471996 TMUB2Q71RG4 321 aa11.54□□□□□ -0.56
SORT1-203ENST00000471996 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
SORT1-203ENST00000471996 LINC00526Q96FQ7 95 aa11.54□□□□□ -0.56
SORT1-203ENST00000471996 PAGE4O60829 102 aa11.53□□□□□ -0.56
SORT1-203ENST00000471996 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
SORT1-203ENST00000471996 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
SORT1-203ENST00000471996 COTL1Q14019 142 aa11.53□□□□□ -0.56
SORT1-203ENST00000471996 EIF5AL1Q6IS14 154 aaKnown RBP11.53□□□□□ -0.56
SORT1-203ENST00000471996 RASL11AQ6T310 242 aa11.53□□□□□ -0.56
SORT1-203ENST00000471996 A0A1W2PNN7 141 aa11.52□□□□□ -0.57
SORT1-203ENST00000471996 MLST8Q9BVC4 326 aa11.52□□□□□ -0.57
SORT1-203ENST00000471996 NIT2Q9NQR4 276 aa11.52□□□□□ -0.57
SORT1-203ENST00000471996 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
SORT1-203ENST00000471996 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
SORT1-203ENST00000471996 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
SORT1-203ENST00000471996 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
SORT1-203ENST00000471996 TCTE3Q8IZS6 198 aa11.5□□□□□ -0.57
SORT1-203ENST00000471996 DIRC1Q969H9 104 aa11.5□□□□□ -0.57
SORT1-203ENST00000471996 TEX46H3BTG2 121 aa11.49□□□□□ -0.57
SORT1-203ENST00000471996 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
SORT1-203ENST00000471996 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
SORT1-203ENST00000471996 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
SORT1-203ENST00000471996 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
SORT1-203ENST00000471996 BAGE2Q86Y30 109 aa11.48□□□□□ -0.57
SORT1-203ENST00000471996 MANBALQ9NQG1 85 aa11.48□□□□□ -0.57
SORT1-203ENST00000471996 LOC107984640A0A0U1RRK4 108 aa11.47□□□□□ -0.57
SORT1-203ENST00000471996 XCL1P47992 114 aa11.47□□□□□ -0.57
SORT1-203ENST00000471996 A0A1B0GV50 99 aa11.46□□□□□ -0.57
SORT1-203ENST00000471996 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
SORT1-203ENST00000471996 IGLV7-43P04211 117 aa11.46□□□□□ -0.57
SORT1-203ENST00000471996 RNASEKQ6P5S7 137 aaKnown RBP11.46□□□□□ -0.57
SORT1-203ENST00000471996 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
SORT1-203ENST00000471996 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
SORT1-203ENST00000471996 IGLC6P0CF74 106 aa11.45□□□□□ -0.58
SORT1-203ENST00000471996 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
SORT1-203ENST00000471996 Q6ZNX1 250 aa11.45□□□□□ -0.58
SORT1-203ENST00000471996 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
SORT1-203ENST00000471996 H0Y9J4 135 aa11.44□□□□□ -0.58
SORT1-203ENST00000471996 PHF5AQ7RTV0 110 aaKnown RBP11.44□□□□□ -0.58
SORT1-203ENST00000471996 OR5A1Q8NGJ0 315 aa11.44□□□□□ -0.58
SORT1-203ENST00000471996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
SORT1-203ENST00000471996 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
SORT1-203ENST00000471996 H7C423 109 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 CCL25O15444 150 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 FGF6P10767 208 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 NTF3P20783 257 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 CAMPP49913 170 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 C11orf52Q96A22 123 aa11.43□□□□□ -0.58
SORT1-203ENST00000471996 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
SORT1-203ENST00000471996 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
SORT1-203ENST00000471996 BCL2P10415 239 aa11.42□□□□□ -0.58
SORT1-203ENST00000471996 ISOC2Q96AB3 205 aa11.42□□□□□ -0.58
SORT1-203ENST00000471996 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
SORT1-203ENST00000471996 IFNA1P01562 189 aa11.41□□□□□ -0.58
SORT1-203ENST00000471996 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
SORT1-203ENST00000471996 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
SORT1-203ENST00000471996 CCL20P78556 96 aa11.41□□□□□ -0.58
SORT1-203ENST00000471996 SMIM12Q96EX1 92 aa11.41□□□□□ -0.58
SORT1-203ENST00000471996 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
SORT1-203ENST00000471996 NCR2O95944 276 aa11.4□□□□□ -0.58
SORT1-203ENST00000471996 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
SORT1-203ENST00000471996 PDE6DO43924 150 aa11.39□□□□□ -0.59
SORT1-203ENST00000471996 APOMO95445 188 aa11.39□□□□□ -0.59
SORT1-203ENST00000471996 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
SORT1-203ENST00000471996 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
SORT1-203ENST00000471996 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
SORT1-203ENST00000471996 F2Z2F3 143 aa11.38□□□□□ -0.59
SORT1-203ENST00000471996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms