RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 IGLV2-18A0A075B6J9 118 aa8.59□□□□□ -1.03
SPTLC1-204ENST00000469778 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
SPTLC1-204ENST00000469778 K7EMI3 77 aa8.59□□□□□ -1.03
SPTLC1-204ENST00000469778 LAGE3Q14657 143 aa8.59□□□□□ -1.03
SPTLC1-204ENST00000469778 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
SPTLC1-204ENST00000469778 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.04
SPTLC1-204ENST00000469778 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 SMKR1H3BMG3 65 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 AMTP48728 403 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
SPTLC1-204ENST00000469778 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 UBE2L6O14933 153 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 S100A1P23297 94 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 G0S2P27469 103 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 FCER1GP30273 86 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 MAP1LC3AQ9H492 121 aa8.57□□□□□ -1.04
SPTLC1-204ENST00000469778 RYR2Q92736 4967 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 M0R2N4 97 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 NPYP01303 97 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 ESDP10768 282 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 RAB5AP20339 215 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 FABP9Q0Z7S8 132 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 LINC00336Q6ZUF6 198 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
SPTLC1-204ENST00000469778 DNAH6Q9C0G6 4158 aa8.55□□□□□ -1.04
SPTLC1-204ENST00000469778 TSHBP01222 138 aa8.55□□□□□ -1.04
SPTLC1-204ENST00000469778 Q0VG73 95 aa8.55□□□□□ -1.04
SPTLC1-204ENST00000469778 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
SPTLC1-204ENST00000469778 RBX1P62877 108 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 Q8N8P6 123 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 RMI2Q96E14 147 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 TM2D2Q9BX73 214 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 SACSQ9NZJ4 4579 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
SPTLC1-204ENST00000469778 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 IGHV3-30-3P0DP02 117 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 GAGE6Q13070 117 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 AMMECR1LQ6DCA0 310 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 CBLN2Q8IUK8 224 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 KRTAP1-5Q9BYS1 174 aa8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-204ENST00000469778 ORMDL2Q53FV1 153 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 MPV17L2Q567V2 206 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 HYDINQ4G0P3 5121 aa8.52□□□□□ -1.05
SPTLC1-204ENST00000469778 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 FGF6P10767 208 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 MIAQ16674 131 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 KLK12Q9UKR0 248 aa8.51□□□□□ -1.05
SPTLC1-204ENST00000469778 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
SPTLC1-204ENST00000469778 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
SPTLC1-204ENST00000469778 CRPP02741 224 aa8.5□□□□□ -1.05
SPTLC1-204ENST00000469778 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
SPTLC1-204ENST00000469778 COLCA2A8K830 154 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 CCL25O15444 150 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 NPSP0C0P6 89 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 RAB5BP61020 215 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 RNASEKQ6P5S7 137 aaKnown RBP8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 Q8N976 141 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
SPTLC1-204ENST00000469778 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 RTL8CO15255 209 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 LINC00269Q8N2A0 174 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 RYR3Q15413 4870 aa8.48□□□□□ -1.05
SPTLC1-204ENST00000469778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 REG3AQ06141 175 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 Q8N3U1 123 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 CYSLTR1Q9Y271 337 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SPTLC1-204ENST00000469778 IGLV4-60A0A075B6I1 120 aa8.46□□□□□ -1.06
SPTLC1-204ENST00000469778 PSCAO43653 123 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms