RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 TMEM243Q9BU79 118 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 CHCHD7Q9BUK0 85 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 TMEM262E9PQX1 116 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 UBE2L6O14933 153 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 C10orf126Q8N4M7 172 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 IGLV2-18A0A075B6J9 118 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 A0A087WX48 190 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 KIAA1644Q3SXP7 199 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 LINC01556Q5JQF7 62 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 NTM-AS1Q6ZSK4 140 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 SMIM2Q9BVW6 85 aa15.68■□□□□ 0.1
SREBF1-208ENST00000469356 NBDYA0A0U1RRE5 68 aa15.67■□□□□ 0.1
SREBF1-208ENST00000469356 PRSS47A8MTI9 375 aa15.67■□□□□ 0.1
SREBF1-208ENST00000469356 VPS13DQ5THJ4 4388 aa15.66■□□□□ 0.1
SREBF1-208ENST00000469356 DNAH1Q9P2D7 4330 aa15.66■□□□□ 0.1
SREBF1-208ENST00000469356 NIT1Q86X76 327 aa15.66■□□□□ 0.1
SREBF1-208ENST00000469356 H7C423 109 aa15.65■□□□□ 0.1
SREBF1-208ENST00000469356 RAB5AP20339 215 aa15.65■□□□□ 0.1
SREBF1-208ENST00000469356 SMAGPQ0VAQ4 97 aa15.65■□□□□ 0.1
SREBF1-208ENST00000469356 TMEM18Q96B42 140 aa15.64■□□□□ 0.09
SREBF1-208ENST00000469356 NXT2Q9NPJ8 142 aaKnown RBP15.64■□□□□ 0.09
SREBF1-208ENST00000469356 TSHBP01222 138 aa15.63■□□□□ 0.09
SREBF1-208ENST00000469356 BTF3P20290 206 aaKnown RBP15.63■□□□□ 0.09
SREBF1-208ENST00000469356 ALKBH7Q9BT30 221 aaPredicted RBP15.63■□□□□ 0.09
SREBF1-208ENST00000469356 LOC389332A0A1B0GUA5 103 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 K7EMI3 77 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 M0R2N4 97 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 IGHV3-30P01768 117 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 IGHV3-33P01772 117 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 IGHV3-30-3P0DP02 117 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 IGHV3-30-5P0DP03 117 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 GAGE6Q13070 117 aa15.62■□□□□ 0.09
SREBF1-208ENST00000469356 Q8N8P6 123 aa15.61■□□□□ 0.09
SREBF1-208ENST00000469356 DEFB104AQ8WTQ1 72 aa15.61■□□□□ 0.09
SREBF1-208ENST00000469356 AMMECR1LQ6DCA0 310 aa15.6■□□□□ 0.09
SREBF1-208ENST00000469356 DNAH6Q9C0G6 4158 aa15.6■□□□□ 0.09
SREBF1-208ENST00000469356 COLCA2A8K830 154 aa15.59■□□□□ 0.09
SREBF1-208ENST00000469356 SCO1O75880 301 aa15.59■□□□□ 0.09
SREBF1-208ENST00000469356 ESDP10768 282 aa15.59■□□□□ 0.09
SREBF1-208ENST00000469356 Q6ZR54 194 aa15.59■□□□□ 0.09
SREBF1-208ENST00000469356 PRSS3P2Q8NHM4 247 aa15.59■□□□□ 0.09
SREBF1-208ENST00000469356 A0A1B0GUV1 79 aa15.58■□□□□ 0.08
SREBF1-208ENST00000469356 G0S2P27469 103 aa15.58■□□□□ 0.08
SREBF1-208ENST00000469356 SACSQ9NZJ4 4579 aa15.57■□□□□ 0.08
SREBF1-208ENST00000469356 ORMDL2Q53FV1 153 aa15.57■□□□□ 0.08
SREBF1-208ENST00000469356 TMEM101Q96IK0 257 aa15.57■□□□□ 0.08
SREBF1-208ENST00000469356 ZNF25P17030 456 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-208ENST00000469356 LAGE3Q14657 143 aa15.56■□□□□ 0.08
SREBF1-208ENST00000469356 MPV17L2Q567V2 206 aa15.56■□□□□ 0.08
SREBF1-208ENST00000469356 NFE4Q86UQ8 179 aa15.56■□□□□ 0.08
SREBF1-208ENST00000469356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-208ENST00000469356 IGKV2-29A2NJV5 120 aaPredicted RBP15.55■□□□□ 0.08
SREBF1-208ENST00000469356 IBA57-AS1B1ANH7 110 aa15.55■□□□□ 0.08
SREBF1-208ENST00000469356 RBX1P62877 108 aa15.55■□□□□ 0.08
SREBF1-208ENST00000469356 C1orf134Q5TEV5 83 aa15.55■□□□□ 0.08
SREBF1-208ENST00000469356 RNASEKQ6P5S7 137 aaKnown RBP15.55■□□□□ 0.08
SREBF1-208ENST00000469356 KMT2AQ03164 3969 aa15.54■□□□□ 0.08
SREBF1-208ENST00000469356 TRAV8-3A0A0A6YYJ7 113 aa15.54■□□□□ 0.08
SREBF1-208ENST00000469356 ANGP03950 147 aaKnown RBP15.54■□□□□ 0.08
SREBF1-208ENST00000469356 IFI27P40305 119 aaPredicted RBP15.54■□□□□ 0.08
SREBF1-208ENST00000469356 RAB5BP61020 215 aa15.54■□□□□ 0.08
SREBF1-208ENST00000469356 DGAT2L7PQ6IED9 249 aa15.54■□□□□ 0.08
SREBF1-208ENST00000469356 C6orf223Q8N319 242 aa15.54■□□□□ 0.08
SREBF1-208ENST00000469356 KMT2CQ8NEZ4 4911 aaKnown RBP15.53■□□□□ 0.08
SREBF1-208ENST00000469356 CRPP02741 224 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 FGF6P10767 208 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 Q0VG73 95 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 FA2HQ7L5A8 372 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 C20orf203Q8NBC4 194 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 KLK12Q9UKR0 248 aa15.53■□□□□ 0.08
SREBF1-208ENST00000469356 TRGC2P03986 189 aa15.52■□□□□ 0.08
SREBF1-208ENST00000469356 MRPL52Q86TS9 123 aaKnown RBP15.51■□□□□ 0.07
SREBF1-208ENST00000469356 Q8N976 141 aa15.51■□□□□ 0.07
SREBF1-208ENST00000469356 OR5A1Q8NGJ0 315 aa15.51■□□□□ 0.07
SREBF1-208ENST00000469356 RMI2Q96E14 147 aa15.51■□□□□ 0.07
SREBF1-208ENST00000469356 LINC01549A6NIU2 74 aa15.5■□□□□ 0.07
SREBF1-208ENST00000469356 C18orf32Q8TCD1 76 aa15.5■□□□□ 0.07
SREBF1-208ENST00000469356 KRTAP1-5Q9BYS1 174 aa15.5■□□□□ 0.07
SREBF1-208ENST00000469356 Q8N3U1 123 aa15.49■□□□□ 0.07
SREBF1-208ENST00000469356 UBE2WQ96B02 151 aa15.49■□□□□ 0.07
SREBF1-208ENST00000469356 TIMM21Q9BVV7 248 aa15.49■□□□□ 0.07
SREBF1-208ENST00000469356 TM2D2Q9BX73 214 aa15.48■□□□□ 0.07
SREBF1-208ENST00000469356 CYSLTR1Q9Y271 337 aa15.48■□□□□ 0.07
SREBF1-208ENST00000469356 CSDC2Q9Y534 153 aaKnown RBP15.48■□□□□ 0.07
SREBF1-208ENST00000469356 COX11Q9Y6N1 276 aa15.48■□□□□ 0.07
SREBF1-208ENST00000469356 SPANXA1Q9NS26 97 aa15.47■□□□□ 0.07
SREBF1-208ENST00000469356 IGLV4-60A0A075B6I1 120 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 LINC00614P0C842 121 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 MIAQ16674 131 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 Q9HAA7 133 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 AP5S1Q9NUS5 200 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 HYDINQ4G0P3 5121 aa15.46■□□□□ 0.07
SREBF1-208ENST00000469356 LINC01546A6NGU7 62 aa15.45■□□□□ 0.06
SREBF1-208ENST00000469356 LINC00269Q8N2A0 174 aa15.45■□□□□ 0.06
SREBF1-208ENST00000469356 UBE2D4Q9Y2X8 147 aa15.45■□□□□ 0.06
SREBF1-208ENST00000469356 REG3AQ06141 175 aa15.44■□□□□ 0.06
SREBF1-208ENST00000469356 C2orf66Q6UXQ4 117 aa15.44■□□□□ 0.06
SREBF1-208ENST00000469356 PRR34Q9NV39 138 aa15.44■□□□□ 0.06
SREBF1-208ENST00000469356 RYR2Q92736 4967 aa15.44■□□□□ 0.06
SREBF1-208ENST00000469356 RPL39P62891 51 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms