RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SMIM3Q9BZL3 60 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 STAG3L2P0CL84 134 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 STAG3L3P0CL85 134 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 XCL1P47992 114 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 CAMPP49913 170 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 NKX2-5P52952 324 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-203ENST00000467533 TSKUQ8WUA8 353 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 AP1S3Q96PC3 154 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 ALG5Q9Y673 324 aa6.03□□□□□ -1.44
HDAC3-203ENST00000467533 PEX7O00628 323 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 SSNA1O43805 119 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 AMMECR1LQ6DCA0 310 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 PGLYRP4Q96LB8 373 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 TMEM167BQ9NRX6 74 aa6.02□□□□□ -1.45
HDAC3-203ENST00000467533 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-203ENST00000467533 M0QY20 66 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 CCL25O15444 150 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 APOMO95445 188 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 COTL1Q14019 142 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 EIF5AL1Q6IS14 154 aaKnown RBP6.01□□□□□ -1.45
HDAC3-203ENST00000467533 RNASEKQ6P5S7 137 aaKnown RBP6.01□□□□□ -1.45
HDAC3-203ENST00000467533 SSBP4Q9BWG4 385 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-203ENST00000467533 MED28Q9H204 178 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 ZFP30Q9Y2G7 519 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 HSPB11Q9Y547 144 aa6.01□□□□□ -1.45
HDAC3-203ENST00000467533 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 A0A1B0GVG6 124 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 UBE2G1P62253 170 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 SUMO4Q6EEV6 95 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 COX8CQ7Z4L0 72 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 RAB24Q969Q5 203 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
HDAC3-203ENST00000467533 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
HDAC3-203ENST00000467533 hCG_2014768A0A024R1R8 64 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 A0A1W2PRE2 83 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 H0YIZ8 118 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-203ENST00000467533 SNAI2O43623 268 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 SIX6O95475 246 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 CXorf1O96002 111 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 UBE2BP63146 152 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-203ENST00000467533 NUP35Q8NFH5 326 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
HDAC3-203ENST00000467533 CXCL1P09341 107 aa5.98□□□□□ -1.45
HDAC3-203ENST00000467533 UBE2G2P60604 165 aa5.98□□□□□ -1.45
HDAC3-203ENST00000467533 RASL11AQ6T310 242 aa5.98□□□□□ -1.45
HDAC3-203ENST00000467533 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-203ENST00000467533 FMC1Q96HJ9 113 aa5.98□□□□□ -1.45
HDAC3-203ENST00000467533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-203ENST00000467533 A0A087X002 238 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 FAM168BA1KXE4 195 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-203ENST00000467533 OR5AL1P0C617 328 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 H2BFSP57053 126 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 LINC00173Q6ZV60 143 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 HIST1H2BAQ96A08 127 aa5.97□□□□□ -1.45
HDAC3-203ENST00000467533 LINC00959A0A1B0GUT2 108 aa5.96□□□□□ -1.46
HDAC3-203ENST00000467533 GIPP09681 153 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-203ENST00000467533 AKAP14Q86UN6 197 aa5.96□□□□□ -1.46
HDAC3-203ENST00000467533 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-203ENST00000467533 WFDC1Q9HC57 220 aa5.96□□□□□ -1.46
HDAC3-203ENST00000467533 LTAP01374 205 aa5.95□□□□□ -1.46
HDAC3-203ENST00000467533 MALP21145 153 aa5.95□□□□□ -1.46
HDAC3-203ENST00000467533 SS18Q15532 418 aa5.95□□□□□ -1.46
HDAC3-203ENST00000467533 NIT2Q9NQR4 276 aa5.95□□□□□ -1.46
HDAC3-203ENST00000467533 C19orf71A6NCJ1 209 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 M0QXV9 152 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 BCL2L11O43521 198 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 PET100P0DJ07 73 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 CD164L2Q6UWJ8 174 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 TCTE3Q8IZS6 198 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 PPP1R1CQ8WVI7 109 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 BTF3L4Q96K17 158 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 ACTR3CQ9C0K3 210 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-203ENST00000467533 PPDPFQ9H3Y8 114 aa5.94□□□□□ -1.46
HDAC3-203ENST00000467533 ZNF861PO60384 105 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 PFDN1O60925 122 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 MPC2O95563 127 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 APCSP02743 223 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 CFC1BP0CG36 223 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 ZNF25P17030 456 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-203ENST00000467533 TMEM101Q96IK0 257 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 TPPP3Q9BW30 176 aa5.93□□□□□ -1.46
HDAC3-203ENST00000467533 FAM74A7A6NL05 159 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 H7C423 109 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 MBP02144 154 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 NTF3P20783 257 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 AKR1C3P42330 323 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 C2orf48Q96LS8 159 aa5.92□□□□□ -1.46
HDAC3-203ENST00000467533 NKX6-2Q9C056 277 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-203ENST00000467533 G3V3Q6 166 aa5.91□□□□□ -1.46
HDAC3-203ENST00000467533 COX7A2LO14548 114 aa5.91□□□□□ -1.46
HDAC3-203ENST00000467533 NCR2O95944 276 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms