RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 PDE6DO43924 150 aa11.92□□□□□ -0.5
SRSF4-202ENST00000466448 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
SRSF4-202ENST00000466448 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
SRSF4-202ENST00000466448 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
SRSF4-202ENST00000466448 TMEM243Q9BU79 118 aa11.92□□□□□ -0.5
SRSF4-202ENST00000466448 BCL2P10415 239 aa11.91□□□□□ -0.5
SRSF4-202ENST00000466448 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
SRSF4-202ENST00000466448 PHOX2AO14813 284 aa11.9□□□□□ -0.5
SRSF4-202ENST00000466448 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.5
SRSF4-202ENST00000466448 PLAC8Q9NZF1 115 aa11.9□□□□□ -0.5
SRSF4-202ENST00000466448 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
SRSF4-202ENST00000466448 C15orf56Q8N910 161 aa11.89□□□□□ -0.51
SRSF4-202ENST00000466448 RNF213Q63HN8 5207 aa11.89□□□□□ -0.51
SRSF4-202ENST00000466448 LRP2P98164 4655 aa11.88□□□□□ -0.51
SRSF4-202ENST00000466448 OR2D3Q8NGH3 330 aa11.88□□□□□ -0.51
SRSF4-202ENST00000466448 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
SRSF4-202ENST00000466448 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
SRSF4-202ENST00000466448 CACNG7P62955 275 aa11.87□□□□□ -0.51
SRSF4-202ENST00000466448 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
SRSF4-202ENST00000466448 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
SRSF4-202ENST00000466448 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
SRSF4-202ENST00000466448 C19orf71A6NCJ1 209 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 UBE2L6O14933 153 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 GNG4P50150 75 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 RPS20P60866 119 aaKnown RBP11.86□□□□□ -0.51
SRSF4-202ENST00000466448 COX6A2Q02221 97 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
SRSF4-202ENST00000466448 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
SRSF4-202ENST00000466448 AMTP48728 403 aa11.85□□□□□ -0.51
SRSF4-202ENST00000466448 LYPD6BQ8NI32 183 aa11.85□□□□□ -0.51
SRSF4-202ENST00000466448 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
SRSF4-202ENST00000466448 COTL1Q14019 142 aa11.84□□□□□ -0.51
SRSF4-202ENST00000466448 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
SRSF4-202ENST00000466448 TNXBP22105 4242 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 F2Z2F3 143 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
SRSF4-202ENST00000466448 HIGD2BQ4VC39 106 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 CFAP161Q6P656 301 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 LYZL1Q6UWQ5 148 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 PRSS3P2Q8NHM4 247 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
SRSF4-202ENST00000466448 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 NDUFS6O75380 124 aaKnown RBP11.82□□□□□ -0.52
SRSF4-202ENST00000466448 NTF3P20783 257 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
SRSF4-202ENST00000466448 ODF1Q14990 250 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
SRSF4-202ENST00000466448 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
SRSF4-202ENST00000466448 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
SRSF4-202ENST00000466448 STPG4Q8N801 248 aa11.8□□□□□ -0.52
SRSF4-202ENST00000466448 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
SRSF4-202ENST00000466448 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
SRSF4-202ENST00000466448 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
SRSF4-202ENST00000466448 TRAV26-2A0A0B4J265 109 aa11.78□□□□□ -0.52
SRSF4-202ENST00000466448 CTRLP40313 264 aa11.78□□□□□ -0.52
SRSF4-202ENST00000466448 GATD1Q8NB37 220 aa11.78□□□□□ -0.52
SRSF4-202ENST00000466448 EIF5A2Q9GZV4 153 aaKnown RBP11.78□□□□□ -0.52
SRSF4-202ENST00000466448 A0A096LNI7 61 aa11.77□□□□□ -0.53
SRSF4-202ENST00000466448 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
SRSF4-202ENST00000466448 TWIST1Q15672 202 aa11.76□□□□□ -0.53
SRSF4-202ENST00000466448 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
SRSF4-202ENST00000466448 CNFNQ9BYD5 112 aa11.76□□□□□ -0.53
SRSF4-202ENST00000466448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-202ENST00000466448 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-202ENST00000466448 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SRSF4-202ENST00000466448 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
SRSF4-202ENST00000466448 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
SRSF4-202ENST00000466448 FOXI1Q12951 378 aa11.74□□□□□ -0.53
SRSF4-202ENST00000466448 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
SRSF4-202ENST00000466448 OCC1Q8TAD7 63 aa11.74□□□□□ -0.53
SRSF4-202ENST00000466448 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
SRSF4-202ENST00000466448 NUDT11Q96G61 164 aa11.74□□□□□ -0.53
SRSF4-202ENST00000466448 NCR2O95944 276 aa11.73□□□□□ -0.53
SRSF4-202ENST00000466448 FGF6P10767 208 aa11.73□□□□□ -0.53
SRSF4-202ENST00000466448 CEBPGP53567 150 aa11.73□□□□□ -0.53
SRSF4-202ENST00000466448 H7C423 109 aa11.72□□□□□ -0.53
SRSF4-202ENST00000466448 APCSP02743 223 aa11.72□□□□□ -0.53
SRSF4-202ENST00000466448 KRTAP10-8P60410 259 aa11.72□□□□□ -0.53
SRSF4-202ENST00000466448 SPINK6Q6UWN8 80 aa11.72□□□□□ -0.53
SRSF4-202ENST00000466448 K7EN84 100 aa11.71□□□□□ -0.53
SRSF4-202ENST00000466448 XCL1P47992 114 aa11.71□□□□□ -0.53
SRSF4-202ENST00000466448 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
SRSF4-202ENST00000466448 RPP21Q9H633 154 aaKnown RBP11.71□□□□□ -0.53
SRSF4-202ENST00000466448 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
SRSF4-202ENST00000466448 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-202ENST00000466448 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
SRSF4-202ENST00000466448 SMIM7Q9BQ49 75 aa11.7□□□□□ -0.54
SRSF4-202ENST00000466448 RNASE7Q9H1E1 156 aaKnown RBP11.7□□□□□ -0.54
SRSF4-202ENST00000466448 SDHAF1A6NFY7 115 aa11.69□□□□□ -0.54
SRSF4-202ENST00000466448 SRP19P09132 144 aaKnown RBP11.69□□□□□ -0.54
SRSF4-202ENST00000466448 REG3GQ6UW15 175 aa11.69□□□□□ -0.54
SRSF4-202ENST00000466448 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
SRSF4-202ENST00000466448 CCL25O15444 150 aa11.68□□□□□ -0.54
SRSF4-202ENST00000466448 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
SRSF4-202ENST00000466448 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.542e-6■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms