RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TPPP3Q9BW30 176 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
HDAC6-214ENST00000465269 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 TMEM262E9PQX1 116 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 FSIP2Q5CZC0 6907 aa9.35□□□□□ -0.91
HDAC6-214ENST00000465269 M0R381 172 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 CRPP02741 224 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 SLPIP03973 132 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 CXCL1P09341 107 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 ELOBQ15370 118 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
HDAC6-214ENST00000465269 A8MWL6 223 aa9.33□□□□□ -0.92
HDAC6-214ENST00000465269 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
HDAC6-214ENST00000465269 KRTAP26-1Q6PEX3 210 aa9.33□□□□□ -0.92
HDAC6-214ENST00000465269 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
HDAC6-214ENST00000465269 SSBP4Q9BWG4 385 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-214ENST00000465269 V9GYV3 84 aa9.33□□□□□ -0.92
HDAC6-214ENST00000465269 SNAI2O43623 268 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
HDAC6-214ENST00000465269 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 PNRC1Q12796 327 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-214ENST00000465269 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
HDAC6-214ENST00000465269 C10orf91Q5T1B1 145 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 ZFP82Q8N141 532 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 TSKUQ8WUA8 353 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 PTH2Q96A98 100 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 PGLYRP4Q96LB8 373 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
HDAC6-214ENST00000465269 IGHV3-64A0A075B6Q5 118 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 A0A087WWL8 130 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 F2Z2F3 143 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 CT83Q5H943 113 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 ZFP2Q6ZN57 461 aa9.3□□□□□ -0.92
HDAC6-214ENST00000465269 MT-ND4LP03901 98 aa9.29□□□□□ -0.92
HDAC6-214ENST00000465269 NTF3P20783 257 aa9.29□□□□□ -0.92
HDAC6-214ENST00000465269 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
HDAC6-214ENST00000465269 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
HDAC6-214ENST00000465269 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 HIGD1CA8MV81 97 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 A8MWV9 139 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 PPP1R2P9O14990 202 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 APOC3P02656 99 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-214ENST00000465269 CACNG7P62955 275 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 NDUFA5Q16718 116 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 ANAPC16Q96DE5 110 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 GFRA4Q9GZZ7 299 aa9.28□□□□□ -0.92
HDAC6-214ENST00000465269 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 CTRLP40313 264 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 TWIST1Q15672 202 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 MAJINQ3KP22 176 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 FAM74A4Q5TZK3 123 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
HDAC6-214ENST00000465269 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 COX6A2Q02221 97 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC6-214ENST00000465269 MIAQ16674 131 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 CLRN3Q8NCR9 226 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 NAT8BQ9UHF3 227 aa9.26□□□□□ -0.93
HDAC6-214ENST00000465269 C7orf77A4D0Y5 90 aa9.25□□□□□ -0.93
HDAC6-214ENST00000465269 H7C1H1 209 aa9.25□□□□□ -0.93
HDAC6-214ENST00000465269 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
HDAC6-214ENST00000465269 BORCS7Q96B45 105 aa9.25□□□□□ -0.93
HDAC6-214ENST00000465269 RPS10P5Q9NQ39 176 aa9.25□□□□□ -0.93
HDAC6-214ENST00000465269 TRBV6-8A0A0A6YYG3 113 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 UBE2D3P61077 147 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 UBE2D2P62837 147 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 STPG4Q8N801 248 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
HDAC6-214ENST00000465269 F5H697 171 aa9.23□□□□□ -0.93
HDAC6-214ENST00000465269 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
HDAC6-214ENST00000465269 AP1S3Q96PC3 154 aa9.23□□□□□ -0.93
HDAC6-214ENST00000465269 CHCHD5Q9BSY4 110 aa9.23□□□□□ -0.93
HDAC6-214ENST00000465269 CTDSP1Q9GZU7 261 aa9.23□□□□□ -0.93
HDAC6-214ENST00000465269 RHODO00212 210 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 SNAPINO95295 136 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 MGPP08493 103 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 RIGQ13278 110 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 ZNF56Q15929 161 aa9.22□□□□□ -0.93
HDAC6-214ENST00000465269 SVBPQ8N300 66 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms