RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 A8MWL6 223 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
MRPL55-225ENST00000465268 MIAQ16674 131 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 CT83Q5H943 113 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 RASL11AQ6T310 242 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 FAM210AQ96ND0 272 aa9.64□□□□□ -0.87
MRPL55-225ENST00000465268 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 TRAV26-2A0A0B4J265 109 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
MRPL55-225ENST00000465268 CTRLP40313 264 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 TEX261Q6UWH6 196 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
MRPL55-225ENST00000465268 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
MRPL55-225ENST00000465268 PANO1I0J062 215 aa9.62□□□□□ -0.87
MRPL55-225ENST00000465268 GATD1Q8NB37 220 aa9.62□□□□□ -0.87
MRPL55-225ENST00000465268 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
MRPL55-225ENST00000465268 SMIM7Q9BQ49 75 aa9.62□□□□□ -0.87
MRPL55-225ENST00000465268 REG3AQ06141 175 aa9.61□□□□□ -0.87
MRPL55-225ENST00000465268 TWIST1Q15672 202 aa9.61□□□□□ -0.87
MRPL55-225ENST00000465268 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
MRPL55-225ENST00000465268 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
MRPL55-225ENST00000465268 NIT2Q9NQR4 276 aa9.61□□□□□ -0.87
MRPL55-225ENST00000465268 ZNF727A8MUV8 499 aa9.6□□□□□ -0.87
MRPL55-225ENST00000465268 GATCO43716 136 aaKnown RBP9.6□□□□□ -0.87
MRPL55-225ENST00000465268 PEA15Q15121 130 aa9.6□□□□□ -0.87
MRPL55-225ENST00000465268 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
MRPL55-225ENST00000465268 A0A1B0GVG6 124 aa9.59□□□□□ -0.87
MRPL55-225ENST00000465268 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
MRPL55-225ENST00000465268 PGLYRP4Q96LB8 373 aa9.59□□□□□ -0.87
MRPL55-225ENST00000465268 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
MRPL55-225ENST00000465268 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
MRPL55-225ENST00000465268 SLPIP03973 132 aa9.58□□□□□ -0.88
MRPL55-225ENST00000465268 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
MRPL55-225ENST00000465268 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
MRPL55-225ENST00000465268 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-225ENST00000465268 J3QL48 77 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 CEBPGP53567 150 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 TMEM241Q24JQ0 296 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 DGAT2L7PQ6IED9 249 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
MRPL55-225ENST00000465268 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
MRPL55-225ENST00000465268 AMTP48728 403 aa9.56□□□□□ -0.88
MRPL55-225ENST00000465268 COTL1Q14019 142 aa9.56□□□□□ -0.88
MRPL55-225ENST00000465268 LINC01551Q86U37 167 aa9.56□□□□□ -0.88
MRPL55-225ENST00000465268 TSKUQ8WUA8 353 aa9.56□□□□□ -0.88
MRPL55-225ENST00000465268 HNRNPA3P51991 378 aaKnown RBP9.55□□□□□ -0.88
MRPL55-225ENST00000465268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
MRPL55-225ENST00000465268 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
MRPL55-225ENST00000465268 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
MRPL55-225ENST00000465268 PPP1R17O96001 155 aa9.54□□□□□ -0.88
MRPL55-225ENST00000465268 RAB14P61106 215 aa9.54□□□□□ -0.88
MRPL55-225ENST00000465268 IGKV3OR2-268A0A0C4DH90 116 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 A0A1B0GUT8 65 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 hDV102S1A0JD36 115 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 UBE2L6O14933 153 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 NCR2O95944 276 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
MRPL55-225ENST00000465268 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
MRPL55-225ENST00000465268 A0A1B0GW15 77 aa9.52□□□□□ -0.89
MRPL55-225ENST00000465268 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
MRPL55-225ENST00000465268 RIGQ13278 110 aa9.52□□□□□ -0.89
MRPL55-225ENST00000465268 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
MRPL55-225ENST00000465268 CLRN3Q8NCR9 226 aa9.52□□□□□ -0.89
MRPL55-225ENST00000465268 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
MRPL55-225ENST00000465268 H7C423 109 aa9.51□□□□□ -0.89
MRPL55-225ENST00000465268 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
MRPL55-225ENST00000465268 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
MRPL55-225ENST00000465268 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
MRPL55-225ENST00000465268 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
MRPL55-225ENST00000465268 S100A8P05109 93 aa9.5□□□□□ -0.89
MRPL55-225ENST00000465268 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
MRPL55-225ENST00000465268 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
MRPL55-225ENST00000465268 NAT8BQ9UHF3 227 aa9.5□□□□□ -0.89
MRPL55-225ENST00000465268 FGF6P10767 208 aa9.49□□□□□ -0.89
MRPL55-225ENST00000465268 RPS10P46783 165 aaKnown RBP9.49□□□□□ -0.89
MRPL55-225ENST00000465268 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
MRPL55-225ENST00000465268 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
MRPL55-225ENST00000465268 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
MRPL55-225ENST00000465268 TSHBP01222 138 aa9.48□□□□□ -0.89
MRPL55-225ENST00000465268 APCSP02743 223 aa9.48□□□□□ -0.89
MRPL55-225ENST00000465268 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
MRPL55-225ENST00000465268 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
MRPL55-225ENST00000465268 RNASEKQ6P5S7 137 aaKnown RBP9.48□□□□□ -0.89
MRPL55-225ENST00000465268 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
MRPL55-225ENST00000465268 C9JQL5 133 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 PMCHP20382 165 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
MRPL55-225ENST00000465268 ADIRFQ15847 76 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 V9GYV3 84 aa9.47□□□□□ -0.89
MRPL55-225ENST00000465268 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.9
MRPL55-225ENST00000465268 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
MRPL55-225ENST00000465268 I3L3M4 83 aa9.46□□□□□ -0.9
MRPL55-225ENST00000465268 ESDP10768 282 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms