RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 KRTAP26-1Q6PEX3 210 aa16.83■□□□□ 0.28
U2AF1-206ENST00000464750 C20orf203Q8NBC4 194 aa16.83■□□□□ 0.28
U2AF1-206ENST00000464750 COTL1Q14019 142 aa16.82■□□□□ 0.28
U2AF1-206ENST00000464750 FAM231DQ6ZW35 169 aa16.82■□□□□ 0.28
U2AF1-206ENST00000464750 GATD1Q8NB37 220 aa16.82■□□□□ 0.28
U2AF1-206ENST00000464750 PLA2G1BP04054 148 aaKnown RBP16.81■□□□□ 0.28
U2AF1-206ENST00000464750 AMTP48728 403 aa16.81■□□□□ 0.28
U2AF1-206ENST00000464750 CHAC1Q9BUX1 264 aa16.81■□□□□ 0.28
U2AF1-206ENST00000464750 IGLV4-60A0A075B6I1 120 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 IGLV10-54A0A075B6I4 117 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 A0A1B0GUV1 79 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 UBE2L6O14933 153 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 PRSS1P07477 247 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 SMIM15Q7Z3B0 74 aa16.8■□□□□ 0.28
U2AF1-206ENST00000464750 EIF5A2Q9GZV4 153 aaKnown RBP16.79■□□□□ 0.28
U2AF1-206ENST00000464750 GFRA4Q9GZZ7 299 aa16.79■□□□□ 0.28
U2AF1-206ENST00000464750 A8MWL6 223 aa16.78■□□□□ 0.28
U2AF1-206ENST00000464750 FOXA3P55318 350 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-206ENST00000464750 RPL39LQ96EH5 51 aaKnown RBP16.78■□□□□ 0.28
U2AF1-206ENST00000464750 CT83Q5H943 113 aa16.77■□□□□ 0.28
U2AF1-206ENST00000464750 SMIM7Q9BQ49 75 aa16.77■□□□□ 0.28
U2AF1-206ENST00000464750 TRAV8-4A0A0B4J246 113 aa16.76■□□□□ 0.27
U2AF1-206ENST00000464750 CIRBP-AS1Q8TBR5 109 aa16.76■□□□□ 0.27
U2AF1-206ENST00000464750 FAM210AQ96ND0 272 aa16.75■□□□□ 0.27
U2AF1-206ENST00000464750 NDUFS6O75380 124 aaKnown RBP16.74■□□□□ 0.27
U2AF1-206ENST00000464750 DGAT2L7PQ6IED9 249 aa16.74■□□□□ 0.27
U2AF1-206ENST00000464750 LINC01551Q86U37 167 aa16.74■□□□□ 0.27
U2AF1-206ENST00000464750 BORCS7Q96B45 105 aa16.73■□□□□ 0.27
U2AF1-206ENST00000464750 A0A1B0GVG6 124 aa16.72■□□□□ 0.27
U2AF1-206ENST00000464750 ZNF727A8MUV8 499 aa16.72■□□□□ 0.27
U2AF1-206ENST00000464750 TEX261Q6UWH6 196 aa16.72■□□□□ 0.27
U2AF1-206ENST00000464750 NCR2O95944 276 aa16.71■□□□□ 0.27
U2AF1-206ENST00000464750 SRP19P09132 144 aaKnown RBP16.71■□□□□ 0.27
U2AF1-206ENST00000464750 C9orf163Q8N9P6 203 aa16.71■□□□□ 0.27
U2AF1-206ENST00000464750 CLRN3Q8NCR9 226 aa16.71■□□□□ 0.27
U2AF1-206ENST00000464750 SDHAF1A6NFY7 115 aa16.7■□□□□ 0.26
U2AF1-206ENST00000464750 APCSP02743 223 aa16.7■□□□□ 0.26
U2AF1-206ENST00000464750 TSKUQ8WUA8 353 aa16.7■□□□□ 0.26
U2AF1-206ENST00000464750 HIGD1CA8MV81 97 aa16.69■□□□□ 0.26
U2AF1-206ENST00000464750 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.68■□□□□ 0.26
U2AF1-206ENST00000464750 hDV102S1A0JD36 115 aa16.68■□□□□ 0.26
U2AF1-206ENST00000464750 IGKV2-29A2NJV5 120 aaPredicted RBP16.68■□□□□ 0.26
U2AF1-206ENST00000464750 AMMECR1LQ6DCA0 310 aa16.68■□□□□ 0.26
U2AF1-206ENST00000464750 OSTCQ9NRP0 149 aa16.68■□□□□ 0.26
U2AF1-206ENST00000464750 IGKV3OR2-268A0A0C4DH90 116 aa16.67■□□□□ 0.26
U2AF1-206ENST00000464750 A0A1B0GUT8 65 aa16.67■□□□□ 0.26
U2AF1-206ENST00000464750 TRBV6-5A0A0K0K1A5 114 aa16.65■□□□□ 0.26
U2AF1-206ENST00000464750 CNBPP62633 177 aaKnown RBP16.65■□□□□ 0.26
U2AF1-206ENST00000464750 RNASEKQ6P5S7 137 aaKnown RBP16.65■□□□□ 0.26
U2AF1-206ENST00000464750 TMEM191AQ9H0A3 160 aa16.65■□□□□ 0.26
U2AF1-206ENST00000464750 FAM231BA6NCW3 169 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 H7C423 109 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 I3L3M4 83 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 GAS8-AS1O95177 125 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 PMCHP20382 165 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 KRTAP10-4P60372 401 aaPredicted RBP16.64■□□□□ 0.25
U2AF1-206ENST00000464750 AP5S1Q9NUS5 200 aa16.64■□□□□ 0.25
U2AF1-206ENST00000464750 GAGE12HA6NDE8 117 aa16.63■□□□□ 0.25
U2AF1-206ENST00000464750 FGF6P10767 208 aa16.63■□□□□ 0.25
U2AF1-206ENST00000464750 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.63■□□□□ 0.25
U2AF1-206ENST00000464750 V9GYV3 84 aa16.63■□□□□ 0.25
U2AF1-206ENST00000464750 J3QL48 77 aa16.62■□□□□ 0.25
U2AF1-206ENST00000464750 RNF185Q96GF1 192 aa16.62■□□□□ 0.25
U2AF1-206ENST00000464750 ST20Q9HBF5 79 aa16.62■□□□□ 0.25
U2AF1-206ENST00000464750 SDIM1Q6ZPB5 146 aa16.61■□□□□ 0.25
U2AF1-206ENST00000464750 ISOC2Q96AB3 205 aa16.61■□□□□ 0.25
U2AF1-206ENST00000464750 TMEM242Q9NWH2 141 aa16.61■□□□□ 0.25
U2AF1-206ENST00000464750 PANO1I0J062 215 aa16.6■□□□□ 0.25
U2AF1-206ENST00000464750 AMN1Q8IY45 258 aa16.6■□□□□ 0.25
U2AF1-206ENST00000464750 C15orf56Q8N910 161 aa16.6■□□□□ 0.25
U2AF1-206ENST00000464750 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.59■□□□□ 0.25
U2AF1-206ENST00000464750 TSHBP01222 138 aa16.59■□□□□ 0.25
U2AF1-206ENST00000464750 ZNF25P17030 456 aaPredicted RBP16.59■□□□□ 0.25
U2AF1-206ENST00000464750 RAB4AP20338 218 aa16.59■□□□□ 0.25
U2AF1-206ENST00000464750 RPS10P46783 165 aaKnown RBP16.59■□□□□ 0.25
U2AF1-206ENST00000464750 TMEM241Q24JQ0 296 aa16.59■□□□□ 0.25
U2AF1-206ENST00000464750 FAM74A3Q4VXF1 159 aa16.59■□□□□ 0.25
U2AF1-206ENST00000464750 CHCHD10Q8WYQ3 142 aaPredicted RBP16.59■□□□□ 0.25
U2AF1-206ENST00000464750 MRAP2Q96G30 205 aa16.59■□□□□ 0.25
U2AF1-206ENST00000464750 SLPIP03973 132 aa16.58■□□□□ 0.24
U2AF1-206ENST00000464750 RPL23P62829 140 aaKnown RBP16.58■□□□□ 0.24
U2AF1-206ENST00000464750 RIGQ13278 110 aa16.58■□□□□ 0.24
U2AF1-206ENST00000464750 NUP35Q8NFH5 326 aa16.58■□□□□ 0.24
U2AF1-206ENST00000464750 PKHD1L1Q86WI1 4243 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 IGHV3-64A0A075B6Q5 118 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 ESDP10768 282 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 ADIRFQ15847 76 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 CFAP161Q6P656 301 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 BTF3L4Q96K17 158 aa16.57■□□□□ 0.24
U2AF1-206ENST00000464750 KRTAP29-1A8MX34 341 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-206ENST00000464750 C9JQL5 133 aa16.56■□□□□ 0.24
U2AF1-206ENST00000464750 RPL37AP61513 92 aaKnown RBP16.56■□□□□ 0.24
U2AF1-206ENST00000464750 TMEM101Q96IK0 257 aa16.56■□□□□ 0.24
U2AF1-206ENST00000464750 POLR2KP53803 58 aaKnown RBP16.55■□□□□ 0.24
U2AF1-206ENST00000464750 OR5A1Q8NGJ0 315 aa16.55■□□□□ 0.24
U2AF1-206ENST00000464750 NAT8Q9UHE5 227 aa16.55■□□□□ 0.24
U2AF1-206ENST00000464750 NAT8BQ9UHF3 227 aa16.55■□□□□ 0.24
U2AF1-206ENST00000464750 LRP1Q07954 4544 aaKnown RBP16.55■□□□□ 0.24
U2AF1-206ENST00000464750 TRBV27A0A0K0K1C4 114 aa16.54■□□□□ 0.24
U2AF1-206ENST00000464750 SMKR1H3BMG3 65 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms