RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
SSB-206ENST00000461708 IGLV4-60A0A075B6I1 120 aa11.44□□□□□ -0.58
SSB-206ENST00000461708 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
SSB-206ENST00000461708 hDV102S1A0JD36 115 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 PANO1I0J062 215 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 BCL2P10415 239 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 TAGLN2P37802 199 aaKnown RBP11.43□□□□□ -0.58
SSB-206ENST00000461708 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
SSB-206ENST00000461708 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SSB-206ENST00000461708 UBE2L6O14933 153 aa11.42□□□□□ -0.58
SSB-206ENST00000461708 COTL1Q14019 142 aa11.42□□□□□ -0.58
SSB-206ENST00000461708 GFRA4Q9GZZ7 299 aa11.42□□□□□ -0.58
SSB-206ENST00000461708 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
SSB-206ENST00000461708 AMTP48728 403 aa11.41□□□□□ -0.58
SSB-206ENST00000461708 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
SSB-206ENST00000461708 NUDT10Q8NFP7 164 aa11.41□□□□□ -0.58
SSB-206ENST00000461708 NUDT11Q96G61 164 aa11.41□□□□□ -0.58
SSB-206ENST00000461708 SLPIP03973 132 aa11.39□□□□□ -0.59
SSB-206ENST00000461708 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
SSB-206ENST00000461708 SLC51BQ86UW2 128 aa11.39□□□□□ -0.59
SSB-206ENST00000461708 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
SSB-206ENST00000461708 NCR2O95944 276 aa11.38□□□□□ -0.59
SSB-206ENST00000461708 TWIST1Q15672 202 aa11.38□□□□□ -0.59
SSB-206ENST00000461708 Q6ZRU5 148 aa11.38□□□□□ -0.59
SSB-206ENST00000461708 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
SSB-206ENST00000461708 GATD1Q8NB37 220 aa11.38□□□□□ -0.59
SSB-206ENST00000461708 H7C423 109 aa11.37□□□□□ -0.59
SSB-206ENST00000461708 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
SSB-206ENST00000461708 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
SSB-206ENST00000461708 C15orf56Q8N910 161 aa11.36□□□□□ -0.59
SSB-206ENST00000461708 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
SSB-206ENST00000461708 PLA2G2DQ9UNK4 145 aa11.36□□□□□ -0.59
SSB-206ENST00000461708 A0A087WYN8 130 aa11.35□□□□□ -0.59
SSB-206ENST00000461708 K7EN84 100 aa11.35□□□□□ -0.59
SSB-206ENST00000461708 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
SSB-206ENST00000461708 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
SSB-206ENST00000461708 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
SSB-206ENST00000461708 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
SSB-206ENST00000461708 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
SSB-206ENST00000461708 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
SSB-206ENST00000461708 TRAV26-2A0A0B4J265 109 aa11.33□□□□□ -0.6
SSB-206ENST00000461708 RPS10P46783 165 aaKnown RBP11.33□□□□□ -0.6
SSB-206ENST00000461708 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
SSB-206ENST00000461708 FAM210AQ96ND0 272 aa11.33□□□□□ -0.6
SSB-206ENST00000461708 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
SSB-206ENST00000461708 CHTF8P0CG12 524 aa11.32□□□□□ -0.6
SSB-206ENST00000461708 MT1HL1P0DM35 61 aa11.32□□□□□ -0.6
SSB-206ENST00000461708 Q6ZNX1 250 aa11.32□□□□□ -0.6
SSB-206ENST00000461708 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
SSB-206ENST00000461708 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
SSB-206ENST00000461708 APCSP02743 223 aa11.31□□□□□ -0.6
SSB-206ENST00000461708 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
SSB-206ENST00000461708 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
SSB-206ENST00000461708 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
SSB-206ENST00000461708 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
SSB-206ENST00000461708 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
SSB-206ENST00000461708 A8MWL6 223 aa11.3□□□□□ -0.6
SSB-206ENST00000461708 FGF6P10767 208 aa11.3□□□□□ -0.6
SSB-206ENST00000461708 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
SSB-206ENST00000461708 CT83Q5H943 113 aa11.3□□□□□ -0.6
SSB-206ENST00000461708 NDUFS6O75380 124 aaKnown RBP11.29□□□□□ -0.6
SSB-206ENST00000461708 COX6A2Q02221 97 aa11.29□□□□□ -0.6
SSB-206ENST00000461708 RNASEKQ6P5S7 137 aaKnown RBP11.29□□□□□ -0.6
SSB-206ENST00000461708 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
SSB-206ENST00000461708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.28□□□□□ -0.6
SSB-206ENST00000461708 IGKV3OR2-268A0A0C4DH90 116 aa11.28□□□□□ -0.6
SSB-206ENST00000461708 IGKV2-29A2NJV5 120 aaPredicted RBP11.28□□□□□ -0.6
SSB-206ENST00000461708 I3L3M4 83 aa11.28□□□□□ -0.6
SSB-206ENST00000461708 GATCO43716 136 aaKnown RBP11.28□□□□□ -0.6
SSB-206ENST00000461708 OR5A1Q8NGJ0 315 aa11.28□□□□□ -0.6
SSB-206ENST00000461708 UBR4Q5T4S7 5183 aa11.27□□□□□ -0.61
SSB-206ENST00000461708 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
SSB-206ENST00000461708 HIGD2BQ4VC39 106 aa11.27□□□□□ -0.61
SSB-206ENST00000461708 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.61
SSB-206ENST00000461708 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.61
SSB-206ENST00000461708 FAM231BA6NCW3 169 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 PHOX2AO14813 284 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 ESDP10768 282 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 PMCHP20382 165 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 FOXI1Q12951 378 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
SSB-206ENST00000461708 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
SSB-206ENST00000461708 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
SSB-206ENST00000461708 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
SSB-206ENST00000461708 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
SSB-206ENST00000461708 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
SSB-206ENST00000461708 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
SSB-206ENST00000461708 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
SSB-206ENST00000461708 TSHBP01222 138 aa11.23□□□□□ -0.61
SSB-206ENST00000461708 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
SSB-206ENST00000461708 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
SSB-206ENST00000461708 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
SSB-206ENST00000461708 TRBV27A0A0K0K1C4 114 aa11.22□□□□□ -0.61
SSB-206ENST00000461708 A0A1B0GUT8 65 aa11.22□□□□□ -0.61
SSB-206ENST00000461708 XCL1P47992 114 aa11.22□□□□□ -0.61
SSB-206ENST00000461708 POLR2KP53803 58 aaKnown RBP11.22□□□□□ -0.61
SSB-206ENST00000461708 STPG4Q8N801 248 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms