RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
CHRD-210ENST00000461684 HLA-DQA1P01909 254 aa10.68□□□□□ -0.7
CHRD-210ENST00000461684 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 TRBV10-1A0A0K0K1A3 114 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 TIRAPP58753 221 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 HAMPP81172 84 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
CHRD-210ENST00000461684 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 LRCOL1A6NCL2 159 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 H7C1H1 209 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 MT-ND6P03923 174 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
CHRD-210ENST00000461684 MRAP2Q96G30 205 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 DNAH8Q96JB1 4490 aa10.66□□□□□ -0.7
CHRD-210ENST00000461684 COLCA2A8K830 154 aa10.65□□□□□ -0.7
CHRD-210ENST00000461684 J3QL48 77 aa10.65□□□□□ -0.7
CHRD-210ENST00000461684 NCR2O95944 276 aa10.65□□□□□ -0.7
CHRD-210ENST00000461684 APCSP02743 223 aa10.65□□□□□ -0.7
CHRD-210ENST00000461684 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
CHRD-210ENST00000461684 TRAPPC1Q9Y5R8 145 aa10.65□□□□□ -0.7
CHRD-210ENST00000461684 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 M0QY20 66 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 CKS2P33552 79 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 RPS10P46783 165 aaKnown RBP10.64□□□□□ -0.71
CHRD-210ENST00000461684 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 Q8N814 137 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
CHRD-210ENST00000461684 IBA57-AS1B1ANH7 110 aa10.63□□□□□ -0.71
CHRD-210ENST00000461684 D6R8Y8 96 aa10.63□□□□□ -0.71
CHRD-210ENST00000461684 RAB5AP20339 215 aa10.63□□□□□ -0.71
CHRD-210ENST00000461684 FABP9Q0Z7S8 132 aa10.63□□□□□ -0.71
CHRD-210ENST00000461684 KIAA1644Q3SXP7 199 aa10.63□□□□□ -0.71
CHRD-210ENST00000461684 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
CHRD-210ENST00000461684 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 TRAV8-6A0A0B4J262 113 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAS8-AS1O95177 125 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 PPBPP02775 128 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 UBE2D3P61077 147 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 UBE2D2P62837 147 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAGE1Q13065 139 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAGE4Q13068 117 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAGE5Q13069 117 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 GAGE13Q4V321 117 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 ATP6V0E2Q8NHE4 81 aa10.62□□□□□ -0.71
CHRD-210ENST00000461684 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
CHRD-210ENST00000461684 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
CHRD-210ENST00000461684 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
CHRD-210ENST00000461684 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
CHRD-210ENST00000461684 Q9HAA7 133 aa10.61□□□□□ -0.71
CHRD-210ENST00000461684 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
CHRD-210ENST00000461684 PPP1R17O96001 155 aa10.6□□□□□ -0.71
CHRD-210ENST00000461684 DNAJC30Q96LL9 226 aa10.6□□□□□ -0.71
CHRD-210ENST00000461684 NPYP01303 97 aa10.59□□□□□ -0.71
CHRD-210ENST00000461684 PLA2G1BP04054 148 aaKnown RBP10.59□□□□□ -0.71
CHRD-210ENST00000461684 NRACQ8N912 160 aa10.59□□□□□ -0.71
CHRD-210ENST00000461684 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
CHRD-210ENST00000461684 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
CHRD-210ENST00000461684 TNFRSF6BO95407 300 aa10.58□□□□□ -0.72
CHRD-210ENST00000461684 TRGC2P03986 189 aa10.58□□□□□ -0.72
CHRD-210ENST00000461684 LELP1Q5T871 98 aa10.58□□□□□ -0.72
CHRD-210ENST00000461684 IGHV3-30P01768 117 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 IGHV3-30-3P0DP02 117 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 IGHV3-30-5P0DP03 117 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 TM2D2Q9BX73 214 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
CHRD-210ENST00000461684 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
CHRD-210ENST00000461684 PHOX2AO14813 284 aa10.56□□□□□ -0.72
CHRD-210ENST00000461684 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
CHRD-210ENST00000461684 LAGE3Q14657 143 aa10.56□□□□□ -0.72
CHRD-210ENST00000461684 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
CHRD-210ENST00000461684 ALKBH7Q9BT30 221 aaPredicted RBP10.56□□□□□ -0.72
CHRD-210ENST00000461684 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
CHRD-210ENST00000461684 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
CHRD-210ENST00000461684 KRTAP29-1A8MX34 341 aaPredicted RBP10.55□□□□□ -0.72
CHRD-210ENST00000461684 C20orf78Q9BR46 151 aa10.55□□□□□ -0.72
CHRD-210ENST00000461684 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
CHRD-210ENST00000461684 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
CHRD-210ENST00000461684 DEFB104AQ8WTQ1 72 aa10.54□□□□□ -0.72
CHRD-210ENST00000461684 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
CHRD-210ENST00000461684 PMCHP20382 165 aa10.53□□□□□ -0.72
CHRD-210ENST00000461684 Q6ZSA8 131 aa10.53□□□□□ -0.72
CHRD-210ENST00000461684 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
CHRD-210ENST00000461684 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
CHRD-210ENST00000461684 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
CHRD-210ENST00000461684 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
CHRD-210ENST00000461684 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
CHRD-210ENST00000461684 TRAV8-3A0A0A6YYJ7 113 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 I3L3M4 83 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 VCYO14598 125 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
CHRD-210ENST00000461684 COTL1Q14019 142 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 IQCJQ1A5X6 159 aa10.51□□□□□ -0.73
CHRD-210ENST00000461684 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms