RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 RAB5BP61020 215 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 Q0VG73 95 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
C9orf78-203ENST00000461539 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
C9orf78-203ENST00000461539 NIT1Q86X76 327 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
C9orf78-203ENST00000461539 MRPS16Q9Y3D3 137 aaKnown RBP6.72□□□□□ -1.33
C9orf78-203ENST00000461539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.71□□□□□ -1.34
C9orf78-203ENST00000461539 IGKV2-29A2NJV5 120 aaPredicted RBP6.71□□□□□ -1.34
C9orf78-203ENST00000461539 TMEM262E9PQX1 116 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 GAGE6Q13070 117 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 LAGE3Q14657 143 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 CHCHD7Q9BUK0 85 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 AP5S1Q9NUS5 200 aa6.71□□□□□ -1.34
C9orf78-203ENST00000461539 K7EMI3 77 aa6.7□□□□□ -1.34
C9orf78-203ENST00000461539 UBE2L6O14933 153 aa6.7□□□□□ -1.34
C9orf78-203ENST00000461539 ESDP10768 282 aa6.7□□□□□ -1.34
C9orf78-203ENST00000461539 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
C9orf78-203ENST00000461539 HSBP1O75506 76 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 SERF1AO75920 110 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 BTF3P20290 206 aaKnown RBP6.69□□□□□ -1.34
C9orf78-203ENST00000461539 NDUFA6P56556 154 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
C9orf78-203ENST00000461539 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
C9orf78-203ENST00000461539 A0A087WX48 190 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 LINC01546A6NGU7 62 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 LY6G6CO95867 125 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 G0S2P27469 103 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 PKIAP61925 76 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
C9orf78-203ENST00000461539 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 C2orf66Q6UXQ4 117 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 UPK3BQ9BT76 320 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 Q9H8V8 135 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 CYSLTR1Q9Y271 337 aa6.68□□□□□ -1.34
C9orf78-203ENST00000461539 H7C423 109 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 SIVA1O15304 175 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 IGHV3-30P01768 117 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 IGHV3-33P01772 117 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 IGHV3-30-3P0DP02 117 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 IGHV3-30-5P0DP03 117 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 FGF6P10767 208 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 SMAGPQ0VAQ4 97 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 LGALS9CQ6DKI2 356 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 TGP01266 2768 aa6.67□□□□□ -1.34
C9orf78-203ENST00000461539 NACAE9PAV3 2078 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 NUPR1O60356 82 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 HBDP02042 147 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 S100A6P06703 90 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 LINC00310P59036 64 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 RBX1P62877 108 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 FAM19A2Q8N3H0 131 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 Q8N3U1 123 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 Q8N976 141 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 OR5A1Q8NGJ0 315 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
C9orf78-203ENST00000461539 DNAH10OSP0CZ25 163 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.34
C9orf78-203ENST00000461539 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
C9orf78-203ENST00000461539 TOMM6Q96B49 74 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 SPANXA1Q9NS26 97 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
C9orf78-203ENST00000461539 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
C9orf78-203ENST00000461539 IGLV4-60A0A075B6I1 120 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 TRAV9-2A0A087WT02 112 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 A0A096LNJ9 63 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 A0A1B0GUV1 79 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
C9orf78-203ENST00000461539 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
C9orf78-203ENST00000461539 TIMM21Q9BVV7 248 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
C9orf78-203ENST00000461539 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
C9orf78-203ENST00000461539 LINC01549A6NIU2 74 aa6.63□□□□□ -1.35
C9orf78-203ENST00000461539 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
C9orf78-203ENST00000461539 Q6ZUT4 128 aa6.63□□□□□ -1.35
C9orf78-203ENST00000461539 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
C9orf78-203ENST00000461539 OPRPNQ99935 248 aaPredicted RBP6.63□□□□□ -1.35
C9orf78-203ENST00000461539 PYGO1Q9Y3Y4 419 aa6.63□□□□□ -1.35
C9orf78-203ENST00000461539 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
C9orf78-203ENST00000461539 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
C9orf78-203ENST00000461539 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
C9orf78-203ENST00000461539 M0R2N4 97 aa6.62□□□□□ -1.35
C9orf78-203ENST00000461539 ATP5LO75964 103 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms