RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TAGLN2P37802 199 aaKnown RBP10.05□□□□□ -0.8
NUP50-213ENST00000461437 PKIAP61925 76 aa10.05□□□□□ -0.8
NUP50-213ENST00000461437 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
NUP50-213ENST00000461437 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
NUP50-213ENST00000461437 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
NUP50-213ENST00000461437 BLOC1S1P78537 153 aa10.04□□□□□ -0.8
NUP50-213ENST00000461437 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
NUP50-213ENST00000461437 CNFNQ9BYD5 112 aa10.04□□□□□ -0.8
NUP50-213ENST00000461437 AMTP48728 403 aa10.03□□□□□ -0.8
NUP50-213ENST00000461437 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
NUP50-213ENST00000461437 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
NUP50-213ENST00000461437 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
NUP50-213ENST00000461437 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
NUP50-213ENST00000461437 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
NUP50-213ENST00000461437 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
NUP50-213ENST00000461437 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
NUP50-213ENST00000461437 COTL1Q14019 142 aa10.02□□□□□ -0.81
NUP50-213ENST00000461437 LRP1Q07954 4544 aaKnown RBP10.02□□□□□ -0.81
NUP50-213ENST00000461437 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
NUP50-213ENST00000461437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
NUP50-213ENST00000461437 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
NUP50-213ENST00000461437 PANO1I0J062 215 aa10.01□□□□□ -0.81
NUP50-213ENST00000461437 UBE2L6O14933 153 aa10.01□□□□□ -0.81
NUP50-213ENST00000461437 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
NUP50-213ENST00000461437 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
NUP50-213ENST00000461437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
NUP50-213ENST00000461437 A0A1B0GUV1 79 aa9.99□□□□□ -0.81
NUP50-213ENST00000461437 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
NUP50-213ENST00000461437 SMIM7Q9BQ49 75 aa9.99□□□□□ -0.81
NUP50-213ENST00000461437 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
NUP50-213ENST00000461437 A8MWL6 223 aa9.98□□□□□ -0.81
NUP50-213ENST00000461437 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
NUP50-213ENST00000461437 LINC01551Q86U37 167 aa9.98□□□□□ -0.81
NUP50-213ENST00000461437 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
NUP50-213ENST00000461437 FAM210AQ96ND0 272 aa9.98□□□□□ -0.81
NUP50-213ENST00000461437 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
NUP50-213ENST00000461437 SMIM15Q7Z3B0 74 aa9.97□□□□□ -0.81
NUP50-213ENST00000461437 GAGE12HA6NDE8 117 aa9.96□□□□□ -0.82
NUP50-213ENST00000461437 ZNF727A8MUV8 499 aa9.96□□□□□ -0.82
NUP50-213ENST00000461437 HIGD1CA8MV81 97 aa9.96□□□□□ -0.82
NUP50-213ENST00000461437 J3QL48 77 aa9.96□□□□□ -0.82
NUP50-213ENST00000461437 SLPIP03973 132 aa9.96□□□□□ -0.82
NUP50-213ENST00000461437 RNASEKQ6P5S7 137 aaKnown RBP9.96□□□□□ -0.82
NUP50-213ENST00000461437 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
NUP50-213ENST00000461437 APCSP02743 223 aa9.95□□□□□ -0.82
NUP50-213ENST00000461437 RPS10P46783 165 aaKnown RBP9.95□□□□□ -0.82
NUP50-213ENST00000461437 AMMECR1LQ6DCA0 310 aa9.95□□□□□ -0.82
NUP50-213ENST00000461437 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
NUP50-213ENST00000461437 RNF185Q96GF1 192 aa9.95□□□□□ -0.82
NUP50-213ENST00000461437 FAM231BA6NCW3 169 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 C9JQL5 133 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 SMKR1H3BMG3 65 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 CT83Q5H943 113 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 SDIM1Q6ZPB5 146 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 TSKUQ8WUA8 353 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 TMEM242Q9NWH2 141 aa9.94□□□□□ -0.82
NUP50-213ENST00000461437 NCR2O95944 276 aa9.93□□□□□ -0.82
NUP50-213ENST00000461437 FGF6P10767 208 aa9.93□□□□□ -0.82
NUP50-213ENST00000461437 PMCHP20382 165 aa9.93□□□□□ -0.82
NUP50-213ENST00000461437 HNRNPA3P51991 378 aaKnown RBP9.93□□□□□ -0.82
NUP50-213ENST00000461437 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
NUP50-213ENST00000461437 BORCS7Q96B45 105 aa9.93□□□□□ -0.82
NUP50-213ENST00000461437 V9GYV3 84 aa9.93□□□□□ -0.82
NUP50-213ENST00000461437 A0A1B0GUT8 65 aa9.92□□□□□ -0.82
NUP50-213ENST00000461437 TSHBP01222 138 aa9.92□□□□□ -0.82
NUP50-213ENST00000461437 CLRN3Q8NCR9 226 aa9.92□□□□□ -0.82
NUP50-213ENST00000461437 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
NUP50-213ENST00000461437 OSTCQ9NRP0 149 aa9.92□□□□□ -0.82
NUP50-213ENST00000461437 I3L3M4 83 aa9.91□□□□□ -0.82
NUP50-213ENST00000461437 RAB4AP20338 218 aa9.91□□□□□ -0.82
NUP50-213ENST00000461437 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
NUP50-213ENST00000461437 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
NUP50-213ENST00000461437 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
NUP50-213ENST00000461437 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.82
NUP50-213ENST00000461437 RPL23P62829 140 aaKnown RBP9.9□□□□□ -0.82
NUP50-213ENST00000461437 TEX261Q6UWH6 196 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 AP5S1Q9NUS5 200 aa9.9□□□□□ -0.82
NUP50-213ENST00000461437 ADIRFQ15847 76 aa9.89□□□□□ -0.83
NUP50-213ENST00000461437 IGHV3-64A0A075B6Q5 118 aa9.88□□□□□ -0.83
NUP50-213ENST00000461437 ESDP10768 282 aa9.88□□□□□ -0.83
NUP50-213ENST00000461437 XCL1P47992 114 aa9.88□□□□□ -0.83
NUP50-213ENST00000461437 POLR2KP53803 58 aaKnown RBP9.88□□□□□ -0.83
NUP50-213ENST00000461437 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
NUP50-213ENST00000461437 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
NUP50-213ENST00000461437 FOXI1Q12951 378 aa9.87□□□□□ -0.83
NUP50-213ENST00000461437 OR5A1Q8NGJ0 315 aa9.87□□□□□ -0.83
NUP50-213ENST00000461437 A0A087WYN8 130 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 H7C423 109 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 CCL25O15444 150 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 NDUFS6O75380 124 aaKnown RBP9.86□□□□□ -0.83
NUP50-213ENST00000461437 COX6A2Q02221 97 aa9.86□□□□□ -0.83
NUP50-213ENST00000461437 RIGQ13278 110 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms