RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
HCFC1-204ENST00000461098 MED28Q9H204 178 aa7.17□□□□□ -1.26
HCFC1-204ENST00000461098 NIT2Q9NQR4 276 aa7.17□□□□□ -1.26
HCFC1-204ENST00000461098 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 AMTP48728 403 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 CACNG7P62955 275 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 CST9LP1Q5W188 147 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
HCFC1-204ENST00000461098 MAP1LC3B2A6NCE7 125 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 COTL1Q14019 142 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 PRR4Q16378 134 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 LINC00299Q6ZSB3 139 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 BAGE2Q86Y30 109 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 MAP1LC3BQ9GZQ8 125 aa7.15□□□□□ -1.26
HCFC1-204ENST00000461098 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 PAGE4O60829 102 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 MT-ND6P03923 174 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 STOML3Q8TAV4 291 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
HCFC1-204ENST00000461098 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 S100A9P06702 114 aaKnown RBP7.13□□□□□ -1.27
HCFC1-204ENST00000461098 NTF3P20783 257 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 XCL1P47992 114 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 Q6ZNX1 250 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 S100ZQ8WXG8 99 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
HCFC1-204ENST00000461098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.12□□□□□ -1.27
HCFC1-204ENST00000461098 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
HCFC1-204ENST00000461098 IGLV7-43P04211 117 aa7.12□□□□□ -1.27
HCFC1-204ENST00000461098 C9orf116Q5BN46 136 aaPredicted RBP7.12□□□□□ -1.27
HCFC1-204ENST00000461098 AKR1C8PQ5T2L2 129 aa7.12□□□□□ -1.27
HCFC1-204ENST00000461098 PHF5AQ7RTV0 110 aaKnown RBP7.12□□□□□ -1.27
HCFC1-204ENST00000461098 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
HCFC1-204ENST00000461098 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
HCFC1-204ENST00000461098 TPPP3Q9BW30 176 aa7.12□□□□□ -1.27
HCFC1-204ENST00000461098 LOC107984640A0A0U1RRK4 108 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 H0Y9J4 135 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 CCL25O15444 150 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 BCL2P10415 239 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 FGF6P10767 208 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
HCFC1-204ENST00000461098 IGLV1-50A0A075B6I6 118 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 BORCS7-ASMTA0A0B4J1R7 106 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 H7C423 109 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 CAMPP49913 170 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 RNASEKQ6P5S7 137 aaKnown RBP7.1□□□□□ -1.27
HCFC1-204ENST00000461098 TMUB2Q71RG4 321 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 ALG5Q9Y673 324 aa7.1□□□□□ -1.27
HCFC1-204ENST00000461098 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
HCFC1-204ENST00000461098 C19orf71A6NCJ1 209 aa7.09□□□□□ -1.27
HCFC1-204ENST00000461098 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.09□□□□□ -1.27
HCFC1-204ENST00000461098 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
HCFC1-204ENST00000461098 MEF2BQ02080 365 aaPredicted RBP7.09□□□□□ -1.27
HCFC1-204ENST00000461098 CYTL1Q9NRR1 136 aa7.09□□□□□ -1.27
HCFC1-204ENST00000461098 NCR2O95944 276 aa7.08□□□□□ -1.28
HCFC1-204ENST00000461098 RPL35P42766 123 aaKnown RBP7.08□□□□□ -1.28
HCFC1-204ENST00000461098 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
HCFC1-204ENST00000461098 F2Z2F3 143 aa7.07□□□□□ -1.28
HCFC1-204ENST00000461098 APOMO95445 188 aa7.07□□□□□ -1.28
HCFC1-204ENST00000461098 TRGC1P0CF51 173 aa7.07□□□□□ -1.28
HCFC1-204ENST00000461098 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
HCFC1-204ENST00000461098 CD164L2Q6UWJ8 174 aa7.07□□□□□ -1.28
HCFC1-204ENST00000461098 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
HCFC1-204ENST00000461098 RPL39LQ96EH5 51 aaKnown RBP7.07□□□□□ -1.28
HCFC1-204ENST00000461098 RPS20P60866 119 aaKnown RBP7.06□□□□□ -1.28
HCFC1-204ENST00000461098 MBD3L1Q8WWY6 194 aa7.06□□□□□ -1.28
HCFC1-204ENST00000461098 APCSP02743 223 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 ESDP10768 282 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 DEFA1P59665 94 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 C9orf62Q8N4C0 152 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 SFT2D1Q8WV19 159 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
HCFC1-204ENST00000461098 A0A087WZ39 114 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 FXYD6-FXYD2A0A087WZ82 144 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 A0A1B0GV50 99 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 G3V3Q6 166 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 CTRLP40313 264 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 SS18Q15532 418 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
HCFC1-204ENST00000461098 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
HCFC1-204ENST00000461098 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 BCL2L11O43521 198 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 PFDN1O60925 122 aa7.03□□□□□ -1.28
HCFC1-204ENST00000461098 GIPP09681 153 aaPredicted RBP7.03□□□□□ -1.28
HCFC1-204ENST00000461098 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
HCFC1-204ENST00000461098 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms