RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 PRSS47A8MTI9 375 aa6.96□□□□□ -1.3
UPF2-204ENST00000460569 TCAPO15273 167 aa6.96□□□□□ -1.3
UPF2-204ENST00000460569 SIVA1O15304 175 aa6.96□□□□□ -1.3
UPF2-204ENST00000460569 Q8N8P6 123 aa6.96□□□□□ -1.3
UPF2-204ENST00000460569 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
UPF2-204ENST00000460569 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
UPF2-204ENST00000460569 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 LCE6AA0A183 80 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 UBE2L6O14933 153 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 IFI27P40305 119 aaPredicted RBP6.95□□□□□ -1.3
UPF2-204ENST00000460569 GAGE6Q13070 117 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 Q9H8V8 135 aa6.95□□□□□ -1.3
UPF2-204ENST00000460569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.94□□□□□ -1.3
UPF2-204ENST00000460569 IGKV2-29A2NJV5 120 aaPredicted RBP6.94□□□□□ -1.3
UPF2-204ENST00000460569 TMEM262E9PQX1 116 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 IGHV3-30P01768 117 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 PKIAP61925 76 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 NIT1Q86X76 327 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 CHCHD7Q9BUK0 85 aa6.94□□□□□ -1.3
UPF2-204ENST00000460569 A0A087WX48 190 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 DNAH10OSP0CZ25 163 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 ESDP10768 282 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 MPV17L2Q567V2 206 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 Q8N3U1 123 aa6.93□□□□□ -1.3
UPF2-204ENST00000460569 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
UPF2-204ENST00000460569 K7EMI3 77 aa6.92□□□□□ -1.3
UPF2-204ENST00000460569 LAGE3Q14657 143 aa6.92□□□□□ -1.3
UPF2-204ENST00000460569 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
UPF2-204ENST00000460569 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
UPF2-204ENST00000460569 TMEM18Q96B42 140 aa6.92□□□□□ -1.3
UPF2-204ENST00000460569 NBDYA0A0U1RRE5 68 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 H7C423 109 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 M0R2N4 97 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 FGF6P10767 208 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 RAB5BP61020 215 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 RBX1P62877 108 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
UPF2-204ENST00000460569 TTC32Q5I0X7 151 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 BAGE3Q86Y29 109 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 Q8N976 141 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 C20orf203Q8NBC4 194 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
UPF2-204ENST00000460569 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BKO60814 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BJP06899 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 LINC00614P0C842 121 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 BTF3P20290 206 aaKnown RBP6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BOP23527 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BBP33778 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BDP58876 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BCP62807 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 SMAGPQ0VAQ4 97 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.3
UPF2-204ENST00000460569 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 URB1-AS1Q96HZ7 61 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 LYSTQ99698 3801 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.3
UPF2-204ENST00000460569 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
UPF2-204ENST00000460569 Q0VG73 95 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
UPF2-204ENST00000460569 IGLV4-60A0A075B6I1 120 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 K7EP13 123 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 SERF1AO75920 110 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 CRPP02741 224 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 G0S2P27469 103 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 CLPSL2Q6UWE3 100 aa6.88□□□□□ -1.31
UPF2-204ENST00000460569 MRPL52Q86TS9 123 aaKnown RBP6.88□□□□□ -1.31
UPF2-204ENST00000460569 CHCHD1Q96BP2 118 aaKnown RBP6.88□□□□□ -1.31
UPF2-204ENST00000460569 HSBP1O75506 76 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 HBDP02042 147 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 Q6ZR54 194 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 Q6ZUT4 128 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 UBE2WQ96B02 151 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 Q9HAA7 133 aa6.87□□□□□ -1.31
UPF2-204ENST00000460569 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms