RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 KRTAP26-1Q6PEX3 210 aa12.34□□□□□ -0.43
COL5A1-203ENST00000460264 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
COL5A1-203ENST00000460264 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
COL5A1-203ENST00000460264 FOXA3P55318 350 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-203ENST00000460264 REG3AQ06141 175 aa12.33□□□□□ -0.44
COL5A1-203ENST00000460264 COTL1Q14019 142 aa12.33□□□□□ -0.44
COL5A1-203ENST00000460264 LINC01551Q86U37 167 aa12.33□□□□□ -0.44
COL5A1-203ENST00000460264 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
COL5A1-203ENST00000460264 A0A1B0GUV1 79 aa12.32□□□□□ -0.44
COL5A1-203ENST00000460264 AMTP48728 403 aa12.32□□□□□ -0.44
COL5A1-203ENST00000460264 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
COL5A1-203ENST00000460264 ZNF727A8MUV8 499 aa12.31□□□□□ -0.44
COL5A1-203ENST00000460264 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
COL5A1-203ENST00000460264 SCXQ7RTU7 201 aa12.31□□□□□ -0.44
COL5A1-203ENST00000460264 RPL39LQ96EH5 51 aaKnown RBP12.31□□□□□ -0.44
COL5A1-203ENST00000460264 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
COL5A1-203ENST00000460264 FLG2Q5D862 2391 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-203ENST00000460264 DMBT1Q9UGM3 2413 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-203ENST00000460264 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
COL5A1-203ENST00000460264 UBE2L6O14933 153 aa12.29□□□□□ -0.44
COL5A1-203ENST00000460264 PRSS1P07477 247 aa12.29□□□□□ -0.44
COL5A1-203ENST00000460264 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
COL5A1-203ENST00000460264 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 TSKUQ8WUA8 353 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
COL5A1-203ENST00000460264 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
COL5A1-203ENST00000460264 A0A1B0GUT8 65 aa12.26□□□□□ -0.45
COL5A1-203ENST00000460264 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
COL5A1-203ENST00000460264 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
COL5A1-203ENST00000460264 NCR2O95944 276 aa12.26□□□□□ -0.45
COL5A1-203ENST00000460264 DGAT2L7PQ6IED9 249 aa12.25□□□□□ -0.45
COL5A1-203ENST00000460264 MYCBP2O75592 4640 aa12.25□□□□□ -0.45
COL5A1-203ENST00000460264 TRBV6-5A0A0K0K1A5 114 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 GAS8-AS1O95177 125 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 APCSP02743 223 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 PLA2G1BP04054 148 aaKnown RBP12.24□□□□□ -0.45
COL5A1-203ENST00000460264 CIRBP-AS1Q8TBR5 109 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 TMEM191AQ9H0A3 160 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 V9GYV3 84 aa12.24□□□□□ -0.45
COL5A1-203ENST00000460264 CLRN3Q8NCR9 226 aa12.23□□□□□ -0.45
COL5A1-203ENST00000460264 ISOC2Q96AB3 205 aa12.23□□□□□ -0.45
COL5A1-203ENST00000460264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-203ENST00000460264 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-203ENST00000460264 C9JQL5 133 aa12.22□□□□□ -0.45
COL5A1-203ENST00000460264 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
COL5A1-203ENST00000460264 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
COL5A1-203ENST00000460264 C9orf163Q8N9P6 203 aa12.22□□□□□ -0.45
COL5A1-203ENST00000460264 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
COL5A1-203ENST00000460264 H7C423 109 aa12.21□□□□□ -0.45
COL5A1-203ENST00000460264 I3L3M4 83 aa12.21□□□□□ -0.45
COL5A1-203ENST00000460264 RPL23P62829 140 aaKnown RBP12.21□□□□□ -0.45
COL5A1-203ENST00000460264 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.45
COL5A1-203ENST00000460264 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 FGF6P10767 208 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 PMCHP20382 165 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
COL5A1-203ENST00000460264 AMN1Q8IY45 258 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 MRAP2Q96G30 205 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 ST20Q9HBF5 79 aa12.2□□□□□ -0.46
COL5A1-203ENST00000460264 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 TSHBP01222 138 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 RAB4AP20338 218 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 RPS10P46783 165 aaKnown RBP12.19□□□□□ -0.46
COL5A1-203ENST00000460264 CNBPP62633 177 aaKnown RBP12.19□□□□□ -0.46
COL5A1-203ENST00000460264 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
COL5A1-203ENST00000460264 RIGQ13278 110 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 ADIRFQ15847 76 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
COL5A1-203ENST00000460264 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
COL5A1-203ENST00000460264 HERC1Q15751 4861 aa12.17□□□□□ -0.46
COL5A1-203ENST00000460264 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
COL5A1-203ENST00000460264 ESDP10768 282 aa12.17□□□□□ -0.46
COL5A1-203ENST00000460264 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-203ENST00000460264 PEA15Q15121 130 aa12.17□□□□□ -0.46
COL5A1-203ENST00000460264 NAT8BQ9UHF3 227 aa12.17□□□□□ -0.46
COL5A1-203ENST00000460264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-203ENST00000460264 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
COL5A1-203ENST00000460264 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
COL5A1-203ENST00000460264 KRTAP10-4P60372 401 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-203ENST00000460264 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
COL5A1-203ENST00000460264 C15orf56Q8N910 161 aa12.16□□□□□ -0.46
COL5A1-203ENST00000460264 SMDT1Q9H4I9 107 aa12.16□□□□□ -0.46
COL5A1-203ENST00000460264 AP5S1Q9NUS5 200 aa12.16□□□□□ -0.46
COL5A1-203ENST00000460264 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
COL5A1-203ENST00000460264 SLPIP03973 132 aa12.15□□□□□ -0.46
COL5A1-203ENST00000460264 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-203ENST00000460264 SMIM27A0A1W2PRY6 76 aa12.14□□□□□ -0.47
COL5A1-203ENST00000460264 PANO1I0J062 215 aa12.14□□□□□ -0.47
COL5A1-203ENST00000460264 BTF3L4Q96K17 158 aa12.14□□□□□ -0.47
COL5A1-203ENST00000460264 NRACQ8N912 160 aa12.13□□□□□ -0.47
COL5A1-203ENST00000460264 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
COL5A1-203ENST00000460264 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
COL5A1-203ENST00000460264 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-203ENST00000460264 CFAP161Q6P656 301 aa12.12□□□□□ -0.47
COL5A1-203ENST00000460264 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
COL5A1-203ENST00000460264 IGHV3-64A0A075B6Q5 118 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms