RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 Q8N976 141 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 TMEM70Q9BUB7 260 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 C1orf43Q9BWL3 253 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
COL7A1-203ENST00000459756 RBX1P62877 108 aa10.63□□□□□ -0.71
COL7A1-203ENST00000459756 GAGE6Q13070 117 aa10.63□□□□□ -0.71
COL7A1-203ENST00000459756 FRZBQ92765 325 aa10.63□□□□□ -0.71
COL7A1-203ENST00000459756 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
COL7A1-203ENST00000459756 A0A1B0GUT8 65 aa10.62□□□□□ -0.71
COL7A1-203ENST00000459756 FOXA3P55318 350 aaPredicted RBP10.62□□□□□ -0.71
COL7A1-203ENST00000459756 MIAQ16674 131 aa10.62□□□□□ -0.71
COL7A1-203ENST00000459756 NUP35Q8NFH5 326 aa10.62□□□□□ -0.71
COL7A1-203ENST00000459756 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
COL7A1-203ENST00000459756 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
COL7A1-203ENST00000459756 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
COL7A1-203ENST00000459756 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
COL7A1-203ENST00000459756 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
COL7A1-203ENST00000459756 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
COL7A1-203ENST00000459756 PPP1R2P9O14990 202 aa10.6□□□□□ -0.71
COL7A1-203ENST00000459756 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
COL7A1-203ENST00000459756 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
COL7A1-203ENST00000459756 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
COL7A1-203ENST00000459756 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
COL7A1-203ENST00000459756 RIGQ13278 110 aa10.59□□□□□ -0.71
COL7A1-203ENST00000459756 COTL1Q14019 142 aa10.59□□□□□ -0.71
COL7A1-203ENST00000459756 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
COL7A1-203ENST00000459756 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
COL7A1-203ENST00000459756 CAMPP49913 170 aa10.58□□□□□ -0.72
COL7A1-203ENST00000459756 C14orf177Q52M58 125 aa10.58□□□□□ -0.72
COL7A1-203ENST00000459756 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
COL7A1-203ENST00000459756 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
COL7A1-203ENST00000459756 UBE2L6O14933 153 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 AMTP48728 403 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 REG3AQ06141 175 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
COL7A1-203ENST00000459756 FAM30AQ9NZY2 134 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 FAT1Q14517 4588 aa10.56□□□□□ -0.72
COL7A1-203ENST00000459756 DNAH8Q96JB1 4490 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 HAMPP81172 84 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 Q5VSD8 79 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 Q6ZSA8 131 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 DEFB104AQ8WTQ1 72 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
COL7A1-203ENST00000459756 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
COL7A1-203ENST00000459756 NCR2O95944 276 aa10.54□□□□□ -0.72
COL7A1-203ENST00000459756 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
COL7A1-203ENST00000459756 IGLV4-60A0A075B6I1 120 aa10.53□□□□□ -0.72
COL7A1-203ENST00000459756 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
COL7A1-203ENST00000459756 APOC3P02656 99 aa10.53□□□□□ -0.72
COL7A1-203ENST00000459756 HBBP68871 147 aa10.53□□□□□ -0.72
COL7A1-203ENST00000459756 KRTAP26-1Q6PEX3 210 aa10.53□□□□□ -0.72
COL7A1-203ENST00000459756 CARHSP1Q9Y2V2 147 aaKnown RBP10.53□□□□□ -0.72
COL7A1-203ENST00000459756 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 SMKR1H3BMG3 65 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 NDUFA5Q16718 116 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 C10orf91Q5T1B1 145 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 SLC7A5P1Q8MH63 180 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 CLRN3Q8NCR9 226 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 RPS10P5Q9NQ39 176 aa10.52□□□□□ -0.73
COL7A1-203ENST00000459756 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 APCSP02743 223 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 RAB4AP20338 218 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 CTDSP1Q9GZU7 261 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 VPS13BQ7Z7G8 4022 aa10.51□□□□□ -0.73
COL7A1-203ENST00000459756 A0A1B0GW15 77 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 H7C423 109 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 I3L3M4 83 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 S100A8P05109 93 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 ST20Q9HBF5 79 aa10.5□□□□□ -0.73
COL7A1-203ENST00000459756 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
COL7A1-203ENST00000459756 PRSS1P07477 247 aa10.49□□□□□ -0.73
COL7A1-203ENST00000459756 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
COL7A1-203ENST00000459756 PMCHP20382 165 aa10.49□□□□□ -0.73
COL7A1-203ENST00000459756 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
COL7A1-203ENST00000459756 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
COL7A1-203ENST00000459756 S100PP25815 95 aa10.48□□□□□ -0.73
COL7A1-203ENST00000459756 RHEBQ15382 184 aa10.48□□□□□ -0.73
COL7A1-203ENST00000459756 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
COL7A1-203ENST00000459756 FAM104BQ5XKR9 115 aa10.48□□□□□ -0.73
COL7A1-203ENST00000459756 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
COL7A1-203ENST00000459756 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
COL7A1-203ENST00000459756 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
COL7A1-203ENST00000459756 SVBPQ8N300 66 aa10.47□□□□□ -0.73
COL7A1-203ENST00000459756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.73
COL7A1-203ENST00000459756 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.73
COL7A1-203ENST00000459756 SNAPINO95295 136 aa10.46□□□□□ -0.73
COL7A1-203ENST00000459756 PPP1R17O96001 155 aa10.46□□□□□ -0.73
COL7A1-203ENST00000459756 FGF6P10767 208 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms