RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
SMPD4-215ENST00000457039 I3L3M4 83 aa9.52□□□□□ -0.89
SMPD4-215ENST00000457039 PPBPP02775 128 aa9.52□□□□□ -0.89
SMPD4-215ENST00000457039 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
SMPD4-215ENST00000457039 ATRAIDQ6UW56 229 aa9.52□□□□□ -0.89
SMPD4-215ENST00000457039 Q6ZRN7 208 aaPredicted RBP9.52□□□□□ -0.89
SMPD4-215ENST00000457039 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
SMPD4-215ENST00000457039 PKD1P98161 4303 aa9.52□□□□□ -0.89
SMPD4-215ENST00000457039 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 PHOX2AO14813 284 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 TSHBP01222 138 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 NPYP01303 97 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
SMPD4-215ENST00000457039 MPV17L2Q567V2 206 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 ORMDL3Q8N138 153 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
SMPD4-215ENST00000457039 A0A087WX48 190 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 VCYO14598 125 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 PMCHP20382 165 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 AMTP48728 403 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 PKIAP61925 76 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 LAGE3Q14657 143 aa9.5□□□□□ -0.89
SMPD4-215ENST00000457039 TMEM262E9PQX1 116 aa9.49□□□□□ -0.89
SMPD4-215ENST00000457039 APCSP02743 223 aa9.49□□□□□ -0.89
SMPD4-215ENST00000457039 ESDP10768 282 aa9.49□□□□□ -0.89
SMPD4-215ENST00000457039 GAGE6Q13070 117 aa9.49□□□□□ -0.89
SMPD4-215ENST00000457039 ELOBQ15370 118 aa9.49□□□□□ -0.89
SMPD4-215ENST00000457039 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 RBX1P62877 108 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 COX19Q49B96 90 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 NFE4Q86UQ8 179 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 Q8N976 141 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 PRELID3AQ96N28 172 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 YPEL4Q96NS1 127 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
SMPD4-215ENST00000457039 TGIF2-C20orf24A0A0A6YYL0 155 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 PRSS29PA6NIE9 313 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
SMPD4-215ENST00000457039 H7C423 109 aa9.46□□□□□ -0.9
SMPD4-215ENST00000457039 TNP2Q05952 138 aa9.46□□□□□ -0.9
SMPD4-215ENST00000457039 C20orf203Q8NBC4 194 aa9.46□□□□□ -0.9
SMPD4-215ENST00000457039 DYNC1H1Q14204 4646 aaKnown RBP9.46□□□□□ -0.9
SMPD4-215ENST00000457039 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-215ENST00000457039 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-215ENST00000457039 UBE2L6O14933 153 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 KIR2DL4Q99706 377 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 Q9HAA7 133 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
SMPD4-215ENST00000457039 MT-ND6P03923 174 aa9.44□□□□□ -0.9
SMPD4-215ENST00000457039 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
SMPD4-215ENST00000457039 KIAA1644Q3SXP7 199 aa9.44□□□□□ -0.9
SMPD4-215ENST00000457039 UBE2WQ96B02 151 aa9.44□□□□□ -0.9
SMPD4-215ENST00000457039 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 TCAPO15273 167 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 FGF6P10767 208 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 FCER1GP30273 86 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
SMPD4-215ENST00000457039 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
SMPD4-215ENST00000457039 Q0VG73 95 aa9.42□□□□□ -0.9
SMPD4-215ENST00000457039 MRPL52Q86TS9 123 aaKnown RBP9.42□□□□□ -0.9
SMPD4-215ENST00000457039 LINC00269Q8N2A0 174 aa9.42□□□□□ -0.9
SMPD4-215ENST00000457039 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
SMPD4-215ENST00000457039 PKHD1P08F94 4074 aa9.42□□□□□ -0.9
SMPD4-215ENST00000457039 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-215ENST00000457039 Q8N8P6 123 aa9.41□□□□□ -0.9
SMPD4-215ENST00000457039 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-215ENST00000457039 LOC389332A0A1B0GUA5 103 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 CRPP02741 224 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 REG3AQ06141 175 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 MIAQ16674 131 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 TM2D2Q9BX73 214 aa9.4□□□□□ -0.9
SMPD4-215ENST00000457039 A0A087WTM6 91 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 LRCOL1A6NCL2 159 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
SMPD4-215ENST00000457039 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 RMI2Q96E14 147 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 TRAPPC1Q9Y5R8 145 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
SMPD4-215ENST00000457039 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
SMPD4-215ENST00000457039 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
SMPD4-215ENST00000457039 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
SMPD4-215ENST00000457039 NXT2Q9NPJ8 142 aaKnown RBP9.38□□□□□ -0.91
SMPD4-215ENST00000457039 CSDC2Q9Y534 153 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms