RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 PAGE4O60829 102 aa8.18□□□□□ -1.1
EPCAM-204ENST00000456133 S100A9P06702 114 aaKnown RBP8.18□□□□□ -1.1
EPCAM-204ENST00000456133 COTL1Q14019 142 aa8.18□□□□□ -1.1
EPCAM-204ENST00000456133 Q5BKY6 102 aa8.18□□□□□ -1.1
EPCAM-204ENST00000456133 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 FOXI1Q12951 378 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 NIT2Q9NQR4 276 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 PKIGQ9Y2B9 76 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 ALG5Q9Y673 324 aa8.17□□□□□ -1.1
EPCAM-204ENST00000456133 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
EPCAM-204ENST00000456133 ZNF664Q8N3J9 261 aa8.16□□□□□ -1.1
EPCAM-204ENST00000456133 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
EPCAM-204ENST00000456133 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
EPCAM-204ENST00000456133 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
EPCAM-204ENST00000456133 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
EPCAM-204ENST00000456133 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
EPCAM-204ENST00000456133 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
EPCAM-204ENST00000456133 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
EPCAM-204ENST00000456133 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
EPCAM-204ENST00000456133 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 DEFA1P59665 94 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 CACNG7P62955 275 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 RNASEKQ6P5S7 137 aaKnown RBP8.13□□□□□ -1.11
EPCAM-204ENST00000456133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
EPCAM-204ENST00000456133 IGHV1-58A0A0C4DH39 117 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
EPCAM-204ENST00000456133 MT-ND6P03923 174 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 XCL1P47992 114 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
EPCAM-204ENST00000456133 FXYD6-FXYD2A0A087WZ82 144 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 NTF3P20783 257 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 Q6ZNX1 250 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 TMUB2Q71RG4 321 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 MED28Q9H204 178 aa8.12□□□□□ -1.11
EPCAM-204ENST00000456133 A0A1B0GV50 99 aa8.11□□□□□ -1.11
EPCAM-204ENST00000456133 CCL25O15444 150 aa8.11□□□□□ -1.11
EPCAM-204ENST00000456133 PFDN1O60925 122 aa8.11□□□□□ -1.11
EPCAM-204ENST00000456133 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
EPCAM-204ENST00000456133 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
EPCAM-204ENST00000456133 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
EPCAM-204ENST00000456133 FGF6P10767 208 aa8.1□□□□□ -1.11
EPCAM-204ENST00000456133 RPS20P60866 119 aaKnown RBP8.1□□□□□ -1.11
EPCAM-204ENST00000456133 PRR4Q16378 134 aa8.1□□□□□ -1.11
EPCAM-204ENST00000456133 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
EPCAM-204ENST00000456133 LINC00959A0A1B0GUT2 108 aa8.09□□□□□ -1.11
EPCAM-204ENST00000456133 ZNF561-AS1K7EIQ3 104 aa8.09□□□□□ -1.11
EPCAM-204ENST00000456133 RPL35P42766 123 aaKnown RBP8.09□□□□□ -1.11
EPCAM-204ENST00000456133 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
EPCAM-204ENST00000456133 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
EPCAM-204ENST00000456133 CYTL1Q9NRR1 136 aa8.09□□□□□ -1.11
EPCAM-204ENST00000456133 H7C423 109 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 APCSP02743 223 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 GIPP09681 153 aaPredicted RBP8.08□□□□□ -1.12
EPCAM-204ENST00000456133 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
EPCAM-204ENST00000456133 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 DIRC1Q969H9 104 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 F2Z2F3 143 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 NCR2O95944 276 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 BCL2P10415 239 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 CAMPP49913 170 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
EPCAM-204ENST00000456133 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
EPCAM-204ENST00000456133 FAM213BQ8TBF2 198 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 MBD3L1Q8WWY6 194 aa8.08□□□□□ -1.12
EPCAM-204ENST00000456133 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
EPCAM-204ENST00000456133 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
EPCAM-204ENST00000456133 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
EPCAM-204ENST00000456133 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
EPCAM-204ENST00000456133 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
EPCAM-204ENST00000456133 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
EPCAM-204ENST00000456133 CENPWQ5EE01 88 aa8.06□□□□□ -1.12
EPCAM-204ENST00000456133 ISOC2Q96AB3 205 aa8.06□□□□□ -1.12
EPCAM-204ENST00000456133 BTF3L4Q96K17 158 aa8.06□□□□□ -1.12
EPCAM-204ENST00000456133 H0Y9J4 135 aa8.05□□□□□ -1.12
EPCAM-204ENST00000456133 IFNA1P01562 189 aa8.05□□□□□ -1.12
EPCAM-204ENST00000456133 SS18Q15532 418 aa8.05□□□□□ -1.12
EPCAM-204ENST00000456133 NUP35Q8NFH5 326 aa8.05□□□□□ -1.12
EPCAM-204ENST00000456133 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
EPCAM-204ENST00000456133 IGLV1-50A0A075B6I6 118 aa8.04□□□□□ -1.12
EPCAM-204ENST00000456133 XKRY2A2RUG3 117 aa8.04□□□□□ -1.12
EPCAM-204ENST00000456133 TWIST1Q15672 202 aa8.04□□□□□ -1.12
EPCAM-204ENST00000456133 CD164L2Q6UWJ8 174 aa8.04□□□□□ -1.12
EPCAM-204ENST00000456133 RAB19A4D1S5 217 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
EPCAM-204ENST00000456133 C11orf52Q96A22 123 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 SDHAF1A6NFY7 115 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 G3V3Q6 166 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
EPCAM-204ENST00000456133 ARPC5O15511 151 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 APOMO95445 188 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 CTRLP40313 264 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 MEF2BQ02080 365 aaPredicted RBP8.03□□□□□ -1.12
EPCAM-204ENST00000456133 C9orf62Q8N4C0 152 aa8.03□□□□□ -1.12
EPCAM-204ENST00000456133 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 350.8 ms