RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GAGE6Q13070 117 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 ELOBQ15370 118 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 PRR27Q6MZM9 219 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 TMUB2Q71RG4 321 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 MBD3L1Q8WWY6 194 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 CHCHD5Q9BSY4 110 aa3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 ZNF471Q9BX82 626 aaPredicted RBP3.03□□□□□ -1.92
GTF3C3-208ENST00000455546 IGLV10-54A0A075B6I4 117 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 RAB19A4D1S5 217 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 PANO1I0J062 215 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 CRPP02741 224 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 SEC11BP0C7V7 166 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 RBX1P62877 108 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 PNRC1Q12796 327 aaPredicted RBP3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 LINC00269Q8N2A0 174 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 KCNRGQ8N5I3 272 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 Q8N9P0 234 aaPredicted RBP3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 OR10G8Q8NGN5 311 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 DERL1Q9BUN8 251 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 TPPP3Q9BW30 176 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 KIF25-AS1Q9Y6Z4 181 aa3.02□□□□□ -1.93
GTF3C3-208ENST00000455546 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 SNAI2O43623 268 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 S100A9P06702 114 aaKnown RBP3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 MGPP08493 103 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 OR5AL1P0C617 328 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 SMIM17P0DL12 118 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 RPL35P42766 123 aaKnown RBP3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 NKX2-5P52952 324 aaPredicted RBP3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 GAGE2BQ13066 116 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 RGS21Q2M5E4 152 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 GAGE2EQ4V326 116 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 GAGE2AQ6NT46 116 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 DPH3Q96FX2 82 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 CHCHD7Q9BUK0 85 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 GAGE2DQ9UEU5 116 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 SRRM2Q9UQ35 2752 aaKnown RBP3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 VPS13BQ7Z7G8 4022 aa3.01□□□□□ -1.93
GTF3C3-208ENST00000455546 IGLV4-60A0A075B6I1 120 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 TRBV25-1A0A075B6N4 114 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 IGKV2D-30A0A075B6S6 120 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 A0A0D9SG52 128 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 KANTRA0A1W2PQU2 76 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 HMSDA8MTL9 139 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 UMAD1C9J7I0 102 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 M0QY20 66 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 PFDN1O60925 122 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 RPL37AP61513 92 aaKnown RBP3□□□□□ -1.93
GTF3C3-208ENST00000455546 REG3AQ06141 175 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 MIAQ16674 131 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 C14orf177Q52M58 125 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 SDIM1Q6ZPB5 146 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 SREK1IP1Q8N9Q2 155 aaPredicted RBP3□□□□□ -1.93
GTF3C3-208ENST00000455546 FER1L6-AS1Q8NA97 138 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 C20orf203Q8NBC4 194 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 OR2D3Q8NGH3 330 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 TCEAL7Q9BRU2 100 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 PRR34Q9NV39 138 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 GNG13Q9P2W3 67 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 VAX2Q9UIW0 290 aa3□□□□□ -1.93
GTF3C3-208ENST00000455546 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
GTF3C3-208ENST00000455546 IGHV1-24A0A0C4DH33 117 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 IGKV3OR2-268A0A0C4DH90 116 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 BCL2L11O43521 198 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 OXTP01178 125 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 CXCL1P09341 107 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 IGLC6P0CF74 106 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 CHTF8P0CG12 524 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 NTF3P20783 257 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 ZNF345Q14585 488 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 CENPWQ5EE01 88 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 LYZL1Q6UWQ5 148 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 MED9Q9NWA0 146 aa2.99□□□□□ -1.93
GTF3C3-208ENST00000455546 TRAV26-2A0A0B4J265 109 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 IFNA1P01562 189 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 P01737 135 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 GNG4P50150 75 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 CACNG7P62955 275 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 IQCJQ1A5X6 159 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 TMEM97Q5BJF2 176 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 OCC1Q8TAD7 63 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 AP1S3Q96PC3 154 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 TMEM243Q9BU79 118 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 NIT2Q9NQR4 276 aa2.98□□□□□ -1.93
GTF3C3-208ENST00000455546 TRBV20OR9-2A0A075B6H5 130 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 A0A087WYN8 130 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 TRAV1-1A0A0B4J248 108 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 A0A1B0GUV1 79 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 F2Z2F3 143 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 H7C1H1 209 aa2.97□□□□□ -1.93
GTF3C3-208ENST00000455546 UBE2L6O14933 153 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms