RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 GAGE1Q13065 139 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 GAGE4Q13068 117 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 GAGE5Q13069 117 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-202ENST00000455113 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 C20orf78Q9BR46 151 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 TNP2Q05952 138 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
COPS7A-202ENST00000455113 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
COPS7A-202ENST00000455113 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.47
COPS7A-202ENST00000455113 PRSS47A8MTI9 375 aa12.08□□□□□ -0.47
COPS7A-202ENST00000455113 POLR2KP53803 58 aaKnown RBP12.08□□□□□ -0.47
COPS7A-202ENST00000455113 RAB5BP61020 215 aa12.08□□□□□ -0.47
COPS7A-202ENST00000455113 NFE4Q86UQ8 179 aa12.08□□□□□ -0.47
COPS7A-202ENST00000455113 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 UBE2D3P61077 147 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 UBE2D2P62837 147 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 LELP1Q5T871 98 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 SMIM2Q9BVW6 85 aa12.08□□□□□ -0.48
COPS7A-202ENST00000455113 DNAH2Q9P225 4427 aa12.07□□□□□ -0.48
COPS7A-202ENST00000455113 IFI27P40305 119 aaPredicted RBP12.06□□□□□ -0.48
COPS7A-202ENST00000455113 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
COPS7A-202ENST00000455113 Q0VG73 95 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 TRBV27A0A0K0K1C4 114 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 VCYO14598 125 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 PMCHP20382 165 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
COPS7A-202ENST00000455113 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
COPS7A-202ENST00000455113 BAGE3Q86Y29 109 aa12.05□□□□□ -0.48
COPS7A-202ENST00000455113 Q8N8P6 123 aa12.05□□□□□ -0.48
COPS7A-202ENST00000455113 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
COPS7A-202ENST00000455113 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
COPS7A-202ENST00000455113 I3L3M4 83 aa12.04□□□□□ -0.48
COPS7A-202ENST00000455113 EREGO14944 169 aa12.03□□□□□ -0.48
COPS7A-202ENST00000455113 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
COPS7A-202ENST00000455113 NIT1Q86X76 327 aa12.03□□□□□ -0.48
COPS7A-202ENST00000455113 URB1-AS1Q96HZ7 61 aa12.03□□□□□ -0.48
COPS7A-202ENST00000455113 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
COPS7A-202ENST00000455113 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.48
COPS7A-202ENST00000455113 TCAPO15273 167 aa12.02□□□□□ -0.49
COPS7A-202ENST00000455113 LINC00614P0C842 121 aa12.02□□□□□ -0.49
COPS7A-202ENST00000455113 NDUFA6P56556 154 aa12.02□□□□□ -0.49
COPS7A-202ENST00000455113 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
COPS7A-202ENST00000455113 FA2HQ7L5A8 372 aa12.02□□□□□ -0.49
COPS7A-202ENST00000455113 TSHBP01222 138 aa12.01□□□□□ -0.49
COPS7A-202ENST00000455113 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
COPS7A-202ENST00000455113 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 C16orf90A8MZG2 172 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 SERF1AO75920 110 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 IGHV3-30P01768 117 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 IGHV3-33P01772 117 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 IGHV3-30-5P0DP03 117 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 FCER1GP30273 86 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 LINC00310P59036 64 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 COTL1Q14019 142 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 LINC01546A6NGU7 62 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 AP5S1Q9NUS5 200 aa12□□□□□ -0.49
COPS7A-202ENST00000455113 DNAH17Q9UFH2 4485 aa11.99□□□□□ -0.49
COPS7A-202ENST00000455113 PSCAO43653 123 aa11.99□□□□□ -0.49
COPS7A-202ENST00000455113 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
COPS7A-202ENST00000455113 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
COPS7A-202ENST00000455113 SPATA12Q7Z6I5 190 aa11.99□□□□□ -0.49
COPS7A-202ENST00000455113 CHCHD1Q96BP2 118 aaKnown RBP11.99□□□□□ -0.49
COPS7A-202ENST00000455113 K7EMI3 77 aa11.98□□□□□ -0.49
COPS7A-202ENST00000455113 NUPR1O60356 82 aa11.98□□□□□ -0.49
COPS7A-202ENST00000455113 LAGE3Q14657 143 aa11.98□□□□□ -0.49
COPS7A-202ENST00000455113 COA6Q5JTJ3 125 aaKnown RBP11.98□□□□□ -0.49
COPS7A-202ENST00000455113 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
COPS7A-202ENST00000455113 S100A6P06703 90 aa11.97□□□□□ -0.49
COPS7A-202ENST00000455113 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
COPS7A-202ENST00000455113 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
COPS7A-202ENST00000455113 HSBP1O75506 76 aa11.96□□□□□ -0.49
COPS7A-202ENST00000455113 AMTP48728 403 aa11.96□□□□□ -0.49
COPS7A-202ENST00000455113 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
COPS7A-202ENST00000455113 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
COPS7A-202ENST00000455113 Q9HAA7 133 aa11.95□□□□□ -0.5
COPS7A-202ENST00000455113 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
COPS7A-202ENST00000455113 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
COPS7A-202ENST00000455113 PMCHL1Q16048 86 aa11.94□□□□□ -0.5
COPS7A-202ENST00000455113 A0A087WX48 190 aa11.94□□□□□ -0.5
COPS7A-202ENST00000455113 ESDP10768 282 aa11.94□□□□□ -0.5
COPS7A-202ENST00000455113 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
COPS7A-202ENST00000455113 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
COPS7A-202ENST00000455113 A0A096LNJ9 63 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms