RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
UBE2D4-209ENST00000454428 PTTG1IPP53801 180 aa10.42□□□□□ -0.74
UBE2D4-209ENST00000454428 Q5BKY6 102 aa10.42□□□□□ -0.74
UBE2D4-209ENST00000454428 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
UBE2D4-209ENST00000454428 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
UBE2D4-209ENST00000454428 IGLC6P0CF74 106 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 CACNG7P62955 275 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 COTL1Q14019 142 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 LINC00299Q6ZSB3 139 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 STOML3Q8TAV4 291 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 MED28Q9H204 178 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
UBE2D4-209ENST00000454428 TRAV26-2A0A0B4J265 109 aa10.4□□□□□ -0.74
UBE2D4-209ENST00000454428 BAGE2Q86Y30 109 aa10.4□□□□□ -0.74
UBE2D4-209ENST00000454428 S100ZQ8WXG8 99 aa10.4□□□□□ -0.74
UBE2D4-209ENST00000454428 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
UBE2D4-209ENST00000454428 PAGE4O60829 102 aa10.39□□□□□ -0.75
UBE2D4-209ENST00000454428 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
UBE2D4-209ENST00000454428 S100A9P06702 114 aaKnown RBP10.38□□□□□ -0.75
UBE2D4-209ENST00000454428 PRR4Q16378 134 aa10.38□□□□□ -0.75
UBE2D4-209ENST00000454428 AKR1C8PQ5T2L2 129 aa10.38□□□□□ -0.75
UBE2D4-209ENST00000454428 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 MT-ND6P03923 174 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 XCL1P47992 114 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 Q6ZNX1 250 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
UBE2D4-209ENST00000454428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
UBE2D4-209ENST00000454428 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
UBE2D4-209ENST00000454428 NTF3P20783 257 aa10.36□□□□□ -0.75
UBE2D4-209ENST00000454428 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
UBE2D4-209ENST00000454428 BORCS7-ASMTA0A0B4J1R7 106 aa10.35□□□□□ -0.75
UBE2D4-209ENST00000454428 KRTAP1-4P0C5Y4 121 aa10.35□□□□□ -0.75
UBE2D4-209ENST00000454428 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
UBE2D4-209ENST00000454428 LOC107984640A0A0U1RRK4 108 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 CCL25O15444 150 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 FGF6P10767 208 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 RNASEKQ6P5S7 137 aaKnown RBP10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
UBE2D4-209ENST00000454428 IGLV7-43P04211 117 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 BCL2P10415 239 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 KRTAP11-1Q8IUC1 163 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 GATD1Q8NB37 220 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 DIRC1Q969H9 104 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
UBE2D4-209ENST00000454428 H0Y9J4 135 aa10.32□□□□□ -0.76
UBE2D4-209ENST00000454428 CAMPP49913 170 aa10.32□□□□□ -0.76
UBE2D4-209ENST00000454428 IGLV1-50A0A075B6I6 118 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 H7C423 109 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 TMUB2Q71RG4 321 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 NUP35Q8NFH5 326 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
UBE2D4-209ENST00000454428 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 C19orf71A6NCJ1 209 aa10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 MEF2BQ02080 365 aaPredicted RBP10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
UBE2D4-209ENST00000454428 NCR2O95944 276 aa10.29□□□□□ -0.76
UBE2D4-209ENST00000454428 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
UBE2D4-209ENST00000454428 A0A1B0GV50 99 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 F2Z2F3 143 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 APCSP02743 223 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 ZNF25P17030 456 aaPredicted RBP10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 DEFA1P59665 94 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
UBE2D4-209ENST00000454428 FXYD6-FXYD2A0A087WZ82 144 aa10.27□□□□□ -0.77
UBE2D4-209ENST00000454428 APOMO95445 188 aa10.27□□□□□ -0.77
UBE2D4-209ENST00000454428 PFDN1O60925 122 aa10.26□□□□□ -0.77
UBE2D4-209ENST00000454428 SFT2D1Q8WV19 159 aa10.26□□□□□ -0.77
UBE2D4-209ENST00000454428 G3V3Q6 166 aa10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 GIPP09681 153 aaPredicted RBP10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 CENPWQ5EE01 88 aa10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 C9orf62Q8N4C0 152 aa10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
UBE2D4-209ENST00000454428 ESDP10768 282 aa10.24□□□□□ -0.77
UBE2D4-209ENST00000454428 CTRLP40313 264 aa10.24□□□□□ -0.77
UBE2D4-209ENST00000454428 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
UBE2D4-209ENST00000454428 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
UBE2D4-209ENST00000454428 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
UBE2D4-209ENST00000454428 A0A087WZ39 114 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 FAM168BA1KXE4 195 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 SS18Q15532 418 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
UBE2D4-209ENST00000454428 BCL2L11O43521 198 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms