RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 CHCHD10Q8WYQ3 142 aaPredicted RBP14.63□□□□□ -0.07
NUP50-211ENST00000445721 SCO2A0A1W2PP80 73 aa14.62□□□□□ -0.07
NUP50-211ENST00000445721 COTL1Q14019 142 aa14.62□□□□□ -0.07
NUP50-211ENST00000445721 NIT2Q9NQR4 276 aa14.61□□□□□ -0.07
NUP50-211ENST00000445721 FXYD6-FXYD2A0A087WZ82 144 aa14.6□□□□□ -0.07
NUP50-211ENST00000445721 MED28Q9H204 178 aa14.6□□□□□ -0.07
NUP50-211ENST00000445721 FAM231BA6NCW3 169 aa14.59□□□□□ -0.07
NUP50-211ENST00000445721 FER1L6-AS1Q8NA97 138 aa14.59□□□□□ -0.07
NUP50-211ENST00000445721 PKIGQ9Y2B9 76 aa14.58□□□□□ -0.08
NUP50-211ENST00000445721 IGLC6P0CF74 106 aa14.57□□□□□ -0.08
NUP50-211ENST00000445721 AMMECR1LQ6DCA0 310 aa14.57□□□□□ -0.08
NUP50-211ENST00000445721 LINC00526Q96FQ7 95 aa14.57□□□□□ -0.08
NUP50-211ENST00000445721 PFDN1O60925 122 aa14.56□□□□□ -0.08
NUP50-211ENST00000445721 CACNG7P62955 275 aa14.56□□□□□ -0.08
NUP50-211ENST00000445721 TMUB2Q71RG4 321 aa14.56□□□□□ -0.08
NUP50-211ENST00000445721 A0A1B0GV50 99 aa14.55□□□□□ -0.08
NUP50-211ENST00000445721 FOXI1Q12951 378 aa14.55□□□□□ -0.08
NUP50-211ENST00000445721 CARD19Q96LW7 228 aa14.55□□□□□ -0.08
NUP50-211ENST00000445721 KRTAP9-2Q9BYQ4 174 aa14.55□□□□□ -0.08
NUP50-211ENST00000445721 GIPP09681 153 aaPredicted RBP14.54□□□□□ -0.08
NUP50-211ENST00000445721 RNASEKQ6P5S7 137 aaKnown RBP14.54□□□□□ -0.08
NUP50-211ENST00000445721 OR2D3Q8NGH3 330 aa14.54□□□□□ -0.08
NUP50-211ENST00000445721 SFT2D1Q8WV19 159 aa14.54□□□□□ -0.08
NUP50-211ENST00000445721 TRGC1P0CF51 173 aa14.52□□□□□ -0.09
NUP50-211ENST00000445721 RPS20P60866 119 aaKnown RBP14.52□□□□□ -0.09
NUP50-211ENST00000445721 MUC2Q02817 5179 aa14.52□□□□□ -0.09
NUP50-211ENST00000445721 RPL35P42766 123 aaKnown RBP14.51□□□□□ -0.09
NUP50-211ENST00000445721 XCL1P47992 114 aa14.51□□□□□ -0.09
NUP50-211ENST00000445721 CYTL1Q9NRR1 136 aa14.51□□□□□ -0.09
NUP50-211ENST00000445721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.5□□□□□ -0.09
NUP50-211ENST00000445721 IGKV2-29A2NJV5 120 aaPredicted RBP14.5□□□□□ -0.09
NUP50-211ENST00000445721 ZNF664Q8N3J9 261 aa14.5□□□□□ -0.09
NUP50-211ENST00000445721 IGHV1-58A0A0C4DH39 117 aa14.49□□□□□ -0.09
NUP50-211ENST00000445721 F2Z2F3 143 aa14.49□□□□□ -0.09
NUP50-211ENST00000445721 NTF3P20783 257 aa14.49□□□□□ -0.09
NUP50-211ENST00000445721 PSORS1C2Q9UIG4 136 aa14.49□□□□□ -0.09
NUP50-211ENST00000445721 FGF6P10767 208 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 PTTG1IPP53801 180 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 SYCNQ0VAF6 134 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 GAGE2BQ13066 116 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 LYZL1Q6UWQ5 148 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 Q6ZNX1 250 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 FAM213BQ8TBF2 198 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 MBD3L1Q8WWY6 194 aa14.48□□□□□ -0.09
NUP50-211ENST00000445721 MT-ND6P03923 174 aa14.47□□□□□ -0.09
NUP50-211ENST00000445721 KCNRGQ8N5I3 272 aa14.47□□□□□ -0.09
NUP50-211ENST00000445721 A0A1W2PNN7 141 aa14.46□□□□□ -0.09
NUP50-211ENST00000445721 CCL25O15444 150 aa14.46□□□□□ -0.09
NUP50-211ENST00000445721 PRR26Q8N8Z3 221 aa14.46□□□□□ -0.09
NUP50-211ENST00000445721 OR5A1Q8NGJ0 315 aa14.46□□□□□ -0.09
NUP50-211ENST00000445721 TRAV26-2A0A0B4J265 109 aa14.45□□□□□ -0.1
NUP50-211ENST00000445721 XKRY2A2RUG3 117 aa14.45□□□□□ -0.1
NUP50-211ENST00000445721 H7C423 109 aa14.45□□□□□ -0.1
NUP50-211ENST00000445721 ZNF561-AS1K7EIQ3 104 aa14.45□□□□□ -0.1
NUP50-211ENST00000445721 GATD1Q8NB37 220 aa14.45□□□□□ -0.1
NUP50-211ENST00000445721 LINC00959A0A1B0GUT2 108 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 C19orf71A6NCJ1 209 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 NCR2O95944 276 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 IFNA1P01562 189 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 APCSP02743 223 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 CENPWQ5EE01 88 aa14.44□□□□□ -0.1
NUP50-211ENST00000445721 LOC107984640A0A0U1RRK4 108 aa14.43□□□□□ -0.1
NUP50-211ENST00000445721 ARPC5O15511 151 aa14.43□□□□□ -0.1
NUP50-211ENST00000445721 C1orf137Q5JT78 98 aa14.42□□□□□ -0.1
NUP50-211ENST00000445721 TWIST1Q15672 202 aa14.41□□□□□ -0.1
NUP50-211ENST00000445721 RPL39LQ96EH5 51 aaKnown RBP14.41□□□□□ -0.1
NUP50-211ENST00000445721 BTF3L4Q96K17 158 aa14.41□□□□□ -0.1
NUP50-211ENST00000445721 ZNF25P17030 456 aaPredicted RBP14.4□□□□□ -0.1
NUP50-211ENST00000445721 CAMPP49913 170 aa14.4□□□□□ -0.1
NUP50-211ENST00000445721 TMEM101Q96IK0 257 aa14.4□□□□□ -0.1
NUP50-211ENST00000445721 A0A0U1RQV1 116 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 UMAD1C9J7I0 102 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 G3V3Q6 166 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 C9orf116Q5BN46 136 aaPredicted RBP14.39□□□□□ -0.11
NUP50-211ENST00000445721 C9orf62Q8N4C0 152 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 C11orf52Q96A22 123 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 ISOC2Q96AB3 205 aa14.39□□□□□ -0.11
NUP50-211ENST00000445721 RAB19A4D1S5 217 aa14.38□□□□□ -0.11
NUP50-211ENST00000445721 H2AFB1P0C5Y9 115 aa14.38□□□□□ -0.11
NUP50-211ENST00000445721 BCL2P10415 239 aa14.38□□□□□ -0.11
NUP50-211ENST00000445721 SS18Q15532 418 aa14.38□□□□□ -0.11
NUP50-211ENST00000445721 DIRC1Q969H9 104 aa14.38□□□□□ -0.11
NUP50-211ENST00000445721 CTRLP40313 264 aa14.37□□□□□ -0.11
NUP50-211ENST00000445721 PRR4Q16378 134 aa14.37□□□□□ -0.11
NUP50-211ENST00000445721 CD164L2Q6UWJ8 174 aa14.37□□□□□ -0.11
NUP50-211ENST00000445721 PHF5AQ7RTV0 110 aaKnown RBP14.37□□□□□ -0.11
NUP50-211ENST00000445721 IGLV4-69A0A075B6H9 119 aa14.36□□□□□ -0.11
NUP50-211ENST00000445721 SDHAF1A6NFY7 115 aa14.36□□□□□ -0.11
NUP50-211ENST00000445721 GNG4P50150 75 aa14.36□□□□□ -0.11
NUP50-211ENST00000445721 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
NUP50-211ENST00000445721 PMCHP20382 165 aa14.34□□□□□ -0.11
NUP50-211ENST00000445721 CCL20P78556 96 aa14.34□□□□□ -0.11
NUP50-211ENST00000445721 NUP35Q8NFH5 326 aa14.34□□□□□ -0.11
NUP50-211ENST00000445721 APOMO95445 188 aa14.33□□□□□ -0.12
NUP50-211ENST00000445721 IGLV7-43P04211 117 aa14.33□□□□□ -0.12
NUP50-211ENST00000445721 SMIM12Q96EX1 92 aa14.33□□□□□ -0.12
NUP50-211ENST00000445721 CNFNQ9BYD5 112 aa14.33□□□□□ -0.12
NUP50-211ENST00000445721 MANBALQ9NQG1 85 aa14.33□□□□□ -0.12
NUP50-211ENST00000445721 I3L3M4 83 aa14.32□□□□□ -0.12
NUP50-211ENST00000445721 MALP21145 153 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms