RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NIT2Q9NQR4 276 aa8.84□□□□□ -0.99
PTPRE-203ENST00000442830 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
PTPRE-203ENST00000442830 PDE6DO43924 150 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 GNG4P50150 75 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 CCL20P78556 96 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 C7orf33Q8WU49 177 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 DPH3Q96FX2 82 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 GNG13Q9P2W3 67 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
PTPRE-203ENST00000442830 IGLV10-54A0A075B6I4 117 aa8.82□□□□□ -1
PTPRE-203ENST00000442830 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
PTPRE-203ENST00000442830 IFNA1P01562 189 aa8.82□□□□□ -1
PTPRE-203ENST00000442830 AMTP48728 403 aa8.82□□□□□ -1
PTPRE-203ENST00000442830 SULT1A2P50226 295 aa8.82□□□□□ -1
PTPRE-203ENST00000442830 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
PTPRE-203ENST00000442830 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
PTPRE-203ENST00000442830 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
PTPRE-203ENST00000442830 H7C423 109 aa8.8□□□□□ -1
PTPRE-203ENST00000442830 NCR2O95944 276 aa8.8□□□□□ -1
PTPRE-203ENST00000442830 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
PTPRE-203ENST00000442830 TAGLN2P37802 199 aaKnown RBP8.8□□□□□ -1
PTPRE-203ENST00000442830 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
PTPRE-203ENST00000442830 MEF2BQ02080 365 aaPredicted RBP8.8□□□□□ -1
PTPRE-203ENST00000442830 A0A087WYN8 130 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 TEX261Q6UWH6 196 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 SMIM15Q7Z3B0 74 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 FAM210AQ96ND0 272 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
PTPRE-203ENST00000442830 SMLR1H3BR10 107 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 PANO1I0J062 215 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 NTF3P20783 257 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 CTRLP40313 264 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 RPS10P46783 165 aaKnown RBP8.78□□□□□ -1
PTPRE-203ENST00000442830 AMMECR1LQ6DCA0 310 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 CNFNQ9BYD5 112 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
PTPRE-203ENST00000442830 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
PTPRE-203ENST00000442830 MT1HL1P0DM35 61 aa8.76□□□□□ -1.01
PTPRE-203ENST00000442830 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
PTPRE-203ENST00000442830 TWIST1Q15672 202 aa8.76□□□□□ -1.01
PTPRE-203ENST00000442830 MED9Q9NWA0 146 aa8.76□□□□□ -1.01
PTPRE-203ENST00000442830 RAB19A4D1S5 217 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 GAGE12HA6NDE8 117 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 APCSP02743 223 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 BCL2P10415 239 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
PTPRE-203ENST00000442830 SLPIP03973 132 aa8.74□□□□□ -1.01
PTPRE-203ENST00000442830 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
PTPRE-203ENST00000442830 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
PTPRE-203ENST00000442830 PHOX2AO14813 284 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 COX6A2Q02221 97 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 RNASEKQ6P5S7 137 aaKnown RBP8.73□□□□□ -1.01
PTPRE-203ENST00000442830 GATD1Q8NB37 220 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
PTPRE-203ENST00000442830 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 BTF3L4Q96K17 158 aa8.73□□□□□ -1.01
PTPRE-203ENST00000442830 TRBV20OR9-2A0A075B6H5 130 aa8.72□□□□□ -1.01
PTPRE-203ENST00000442830 MAJINQ3KP22 176 aa8.72□□□□□ -1.01
PTPRE-203ENST00000442830 IGKV3OR2-268A0A0C4DH90 116 aa8.71□□□□□ -1.02
PTPRE-203ENST00000442830 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
PTPRE-203ENST00000442830 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 FGF6P10767 208 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 PRR3P79522 188 aaKnown RBP8.7□□□□□ -1.02
PTPRE-203ENST00000442830 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 STPG4Q8N801 248 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 GTSF1Q8WW33 167 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 LINC01600Q96MT4 127 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
PTPRE-203ENST00000442830 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 SDHAF1A6NFY7 115 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 A8MWL6 223 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 I3L3M4 83 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 PMCHP20382 165 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 SMAGPQ0VAQ4 97 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 Q6ZNX1 250 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 SLC51BQ86UW2 128 aa8.69□□□□□ -1.02
PTPRE-203ENST00000442830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-203ENST00000442830 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 IGKV2-29A2NJV5 120 aaPredicted RBP8.68□□□□□ -1.02
PTPRE-203ENST00000442830 FOXI1Q12951 378 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 CT83Q5H943 113 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 PRSS3P2Q8NHM4 247 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
PTPRE-203ENST00000442830 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
PTPRE-203ENST00000442830 TMEM250H0YL14 139 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 CCL25O15444 150 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 SS18Q15532 418 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 FAM231DQ6ZW35 169 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 ISOC2Q96AB3 205 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms