RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
POLR1E-203ENST00000442009 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
POLR1E-203ENST00000442009 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
POLR1E-203ENST00000442009 HSBP1L1C9JCN9 74 aa13.28□□□□□ -0.28
POLR1E-203ENST00000442009 Q8NAQ8 132 aa13.28□□□□□ -0.28
POLR1E-203ENST00000442009 CHCHD7Q9BUK0 85 aa13.28□□□□□ -0.28
POLR1E-203ENST00000442009 LYRM9A8MSI8 78 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 G3V4G9 280 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 UBE2D3P61077 147 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 UBE2D2P62837 147 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 C14orf144Q96I85 54 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 UQCR10Q9UDW1 63 aa13.27□□□□□ -0.28
POLR1E-203ENST00000442009 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
POLR1E-203ENST00000442009 PRSS29PA6NIE9 313 aa13.27□□□□□ -0.29
POLR1E-203ENST00000442009 DPM2O94777 84 aa13.27□□□□□ -0.29
POLR1E-203ENST00000442009 MIFP14174 115 aa13.27□□□□□ -0.29
POLR1E-203ENST00000442009 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.29
POLR1E-203ENST00000442009 SAMD5Q5TGI4 173 aa13.27□□□□□ -0.29
POLR1E-203ENST00000442009 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.29
POLR1E-203ENST00000442009 F8VRH5 84 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 IGKCP01834 107 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 DEFB130BP0DP73 79 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 DEFB130AP0DP74 79 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 ANKRD39Q53RE8 183 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 STPG4Q8N801 248 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
POLR1E-203ENST00000442009 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
POLR1E-203ENST00000442009 FAM222AQ5U5X8 452 aa13.25□□□□□ -0.29
POLR1E-203ENST00000442009 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
POLR1E-203ENST00000442009 TRGV4A0A0C4DH28 118 aa13.25□□□□□ -0.29
POLR1E-203ENST00000442009 COTL1Q14019 142 aa13.25□□□□□ -0.29
POLR1E-203ENST00000442009 DAZ4Q86SG3 579 aaKnown RBP13.25□□□□□ -0.29
POLR1E-203ENST00000442009 DAZ3Q9NR90 486 aaKnown RBP13.25□□□□□ -0.29
POLR1E-203ENST00000442009 DEFA6Q01524 100 aa13.24□□□□□ -0.29
POLR1E-203ENST00000442009 PMVKQ15126 192 aa13.24□□□□□ -0.29
POLR1E-203ENST00000442009 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
POLR1E-203ENST00000442009 CHTOPQ9Y3Y2 248 aaKnown RBP13.24□□□□□ -0.29
POLR1E-203ENST00000442009 LINC00694P0DN24 101 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 PLNP26678 52 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 GAGE1Q13065 139 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 GAGE4Q13068 117 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 GAGE5Q13069 117 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
POLR1E-203ENST00000442009 OPRPNQ99935 248 aaPredicted RBP13.23□□□□□ -0.29
POLR1E-203ENST00000442009 MGAM2Q2M2H8 2515 aa13.22□□□□□ -0.29
POLR1E-203ENST00000442009 DEFB4AO15263 64 aa13.22□□□□□ -0.29
POLR1E-203ENST00000442009 NPSP0C0P6 89 aa13.22□□□□□ -0.29
POLR1E-203ENST00000442009 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
POLR1E-203ENST00000442009 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
POLR1E-203ENST00000442009 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.29
POLR1E-203ENST00000442009 COX8AP10176 69 aa13.21□□□□□ -0.29
POLR1E-203ENST00000442009 ZC2HC1BQ5TFG8 222 aa13.21□□□□□ -0.29
POLR1E-203ENST00000442009 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
POLR1E-203ENST00000442009 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
POLR1E-203ENST00000442009 CRYBA4P53673 196 aa13.2□□□□□ -0.3
POLR1E-203ENST00000442009 MDFIQ99750 246 aa13.2□□□□□ -0.3
POLR1E-203ENST00000442009 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
POLR1E-203ENST00000442009 FGF6P10767 208 aa13.19□□□□□ -0.3
POLR1E-203ENST00000442009 SLC25A34Q6PIV7 304 aa13.19□□□□□ -0.3
POLR1E-203ENST00000442009 SBSPONQ8IVN8 264 aa13.19□□□□□ -0.3
POLR1E-203ENST00000442009 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
POLR1E-203ENST00000442009 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
POLR1E-203ENST00000442009 AMELXQ99217 191 aa13.18□□□□□ -0.3
POLR1E-203ENST00000442009 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
POLR1E-203ENST00000442009 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
POLR1E-203ENST00000442009 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
POLR1E-203ENST00000442009 TENM3Q9P273 2699 aa13.18□□□□□ -0.3
POLR1E-203ENST00000442009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.18□□□□□ -0.3
POLR1E-203ENST00000442009 IGKV2-29A2NJV5 120 aaPredicted RBP13.18□□□□□ -0.3
POLR1E-203ENST00000442009 MRPS16Q9Y3D3 137 aaKnown RBP13.18□□□□□ -0.3
POLR1E-203ENST00000442009 IGKV2D-26A0A0A0MRZ7 120 aa13.17□□□□□ -0.3
POLR1E-203ENST00000442009 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
POLR1E-203ENST00000442009 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
POLR1E-203ENST00000442009 SPART-AS1P0CW21 52 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 BOD1L2Q8IYS8 172 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 C11orf86A6NJI1 115 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 DLEU1O43261 78 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 HNRNPA3P51991 378 aaKnown RBP13.16□□□□□ -0.3
POLR1E-203ENST00000442009 CTAG1AP78358 180 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
POLR1E-203ENST00000442009 VCX2Q9H322 139 aa13.16□□□□□ -0.3
POLR1E-203ENST00000442009 MRPS36P82909 103 aaKnown RBP13.15□□□□□ -0.3
POLR1E-203ENST00000442009 NFE4Q86UQ8 179 aa13.15□□□□□ -0.3
POLR1E-203ENST00000442009 DAD1P61803 113 aa13.14□□□□□ -0.31
POLR1E-203ENST00000442009 SNHG12Q9BXW3 62 aa13.14□□□□□ -0.31
POLR1E-203ENST00000442009 CSDC2Q9Y534 153 aaKnown RBP13.14□□□□□ -0.31
POLR1E-203ENST00000442009 TCTAP57738 103 aa13.13□□□□□ -0.31
POLR1E-203ENST00000442009 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
POLR1E-203ENST00000442009 PCP2Q8IVA1 136 aa13.13□□□□□ -0.31
POLR1E-203ENST00000442009 RETNQ9HD89 108 aa13.13□□□□□ -0.31
POLR1E-203ENST00000442009 GYPEP15421 78 aa13.12□□□□□ -0.31
POLR1E-203ENST00000442009 C2orf91Q6ZV80 131 aa13.12□□□□□ -0.31
POLR1E-203ENST00000442009 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
POLR1E-203ENST00000442009 M0R143 59 aa13.11□□□□□ -0.31
POLR1E-203ENST00000442009 EREGO14944 169 aa13.11□□□□□ -0.31
POLR1E-203ENST00000442009 ATP5G1P05496 136 aa13.11□□□□□ -0.31
POLR1E-203ENST00000442009 NMUP48645 174 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms