RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 IGLL5B9A064 214 aa14.6□□□□□ -0.07
VPS13B-204ENST00000441350 NUDT3O95989 172 aa14.6□□□□□ -0.07
VPS13B-204ENST00000441350 ESDP10768 282 aa14.6□□□□□ -0.07
VPS13B-204ENST00000441350 LAGE3Q14657 143 aa14.6□□□□□ -0.07
VPS13B-204ENST00000441350 GTSF1LQ9H1H1 148 aa14.6□□□□□ -0.07
VPS13B-204ENST00000441350 S100A6P06703 90 aa14.59□□□□□ -0.07
VPS13B-204ENST00000441350 FCER1GP30273 86 aa14.59□□□□□ -0.07
VPS13B-204ENST00000441350 NUPR2A6NF83 97 aa14.59□□□□□ -0.07
VPS13B-204ENST00000441350 ORMDL2Q53FV1 153 aa14.58□□□□□ -0.08
VPS13B-204ENST00000441350 TMEM97Q5BJF2 176 aa14.58□□□□□ -0.08
VPS13B-204ENST00000441350 HSBP1O75506 76 aa14.57□□□□□ -0.08
VPS13B-204ENST00000441350 TRBV6-8A0A0A6YYG3 113 aa14.56□□□□□ -0.08
VPS13B-204ENST00000441350 TIRAPP58753 221 aa14.56□□□□□ -0.08
VPS13B-204ENST00000441350 WWC2-AS2Q96NR7 200 aa14.56□□□□□ -0.08
VPS13B-204ENST00000441350 CHCHD7Q9BUK0 85 aa14.56□□□□□ -0.08
VPS13B-204ENST00000441350 CSMD3Q7Z407 3707 aa14.56□□□□□ -0.08
VPS13B-204ENST00000441350 A0A096LNJ9 63 aa14.55□□□□□ -0.08
VPS13B-204ENST00000441350 C5orf52A6NGY3 159 aa14.55□□□□□ -0.08
VPS13B-204ENST00000441350 LYPD5Q6UWN5 251 aa14.55□□□□□ -0.08
VPS13B-204ENST00000441350 AMTP48728 403 aa14.55□□□□□ -0.08
VPS13B-204ENST00000441350 SNRPEP62304 92 aaKnown RBP14.55□□□□□ -0.08
VPS13B-204ENST00000441350 PMCHL1Q16048 86 aa14.55□□□□□ -0.08
VPS13B-204ENST00000441350 KLK5Q9Y337 293 aaPredicted RBP14.55□□□□□ -0.08
VPS13B-204ENST00000441350 IGHV1-24A0A0C4DH33 117 aa14.54□□□□□ -0.08
VPS13B-204ENST00000441350 FAM19A2Q8N3H0 131 aa14.54□□□□□ -0.08
VPS13B-204ENST00000441350 C20orf203Q8NBC4 194 aa14.54□□□□□ -0.08
VPS13B-204ENST00000441350 MUC7Q8TAX7 377 aa14.54□□□□□ -0.08
VPS13B-204ENST00000441350 APLNQ9ULZ1 77 aa14.53□□□□□ -0.08
VPS13B-204ENST00000441350 TRBV25-1A0A075B6N4 114 aa14.52□□□□□ -0.08
VPS13B-204ENST00000441350 ESRGQ1W209 222 aa14.52□□□□□ -0.08
VPS13B-204ENST00000441350 HBDP02042 147 aa14.52□□□□□ -0.09
VPS13B-204ENST00000441350 G0S2P27469 103 aa14.52□□□□□ -0.09
VPS13B-204ENST00000441350 HIST3H2BBQ8N257 126 aa14.52□□□□□ -0.09
VPS13B-204ENST00000441350 TMEM243Q9BU79 118 aa14.52□□□□□ -0.09
VPS13B-204ENST00000441350 BTF3P20290 206 aaKnown RBP14.51□□□□□ -0.09
VPS13B-204ENST00000441350 PDZD11Q5EBL8 140 aa14.51□□□□□ -0.09
VPS13B-204ENST00000441350 LELP1Q5T871 98 aa14.51□□□□□ -0.09
VPS13B-204ENST00000441350 C2orf66Q6UXQ4 117 aa14.51□□□□□ -0.09
VPS13B-204ENST00000441350 TCTAP57738 103 aa14.5□□□□□ -0.09
VPS13B-204ENST00000441350 RPL39P62891 51 aaKnown RBP14.5□□□□□ -0.09
VPS13B-204ENST00000441350 ZFAND6Q6FIF0 208 aa14.5□□□□□ -0.09
VPS13B-204ENST00000441350 TOMM6Q96B49 74 aa14.5□□□□□ -0.09
VPS13B-204ENST00000441350 CYSLTR1Q9Y271 337 aa14.5□□□□□ -0.09
VPS13B-204ENST00000441350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.48□□□□□ -0.09
VPS13B-204ENST00000441350 IGKV2-29A2NJV5 120 aaPredicted RBP14.48□□□□□ -0.09
VPS13B-204ENST00000441350 PACRGQ96M98 296 aaPredicted RBP14.48□□□□□ -0.09
VPS13B-204ENST00000441350 STARD9Q9P2P6 4700 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 LINC01549A6NIU2 74 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 IFITM10A6NMD0 228 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 H7C423 109 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 TMEM18Q96B42 140 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 CHCHD5Q9BSY4 110 aa14.47□□□□□ -0.09
VPS13B-204ENST00000441350 IGIPA6NJ69 53 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 S100A2P29034 98 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 CCL18P55774 89 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 HIST1H2BLQ99880 126 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 UBE2D4Q9Y2X8 147 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 LINC00588Q9Y4M8 146 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 TENM2Q9NT68 2774 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 TRAV8-6A0A0B4J262 113 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 UBE2L6O14933 153 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 LEPROTL1O95214 131 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 FGF6P10767 208 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 GAGE6Q13070 117 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 MRPL52Q86TS9 123 aaKnown RBP14.44□□□□□ -0.1
VPS13B-204ENST00000441350 TIMM21Q9BVV7 248 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 PYGO1Q9Y3Y4 419 aa14.44□□□□□ -0.1
VPS13B-204ENST00000441350 LINC00173Q6ZV60 143 aa14.43□□□□□ -0.1
VPS13B-204ENST00000441350 ERASQ7Z444 233 aa14.43□□□□□ -0.1
VPS13B-204ENST00000441350 SCGB3A1Q96QR1 104 aa14.43□□□□□ -0.1
VPS13B-204ENST00000441350 MRPS16Q9Y3D3 137 aaKnown RBP14.43□□□□□ -0.1
VPS13B-204ENST00000441350 FABP4P15090 132 aa14.42□□□□□ -0.1
VPS13B-204ENST00000441350 SPANXA1Q9NS26 97 aa14.42□□□□□ -0.1
VPS13B-204ENST00000441350 PLECQ15149 4684 aaKnown RBP14.42□□□□□ -0.1
VPS13B-204ENST00000441350 FAM104AQ969W3 186 aa14.41□□□□□ -0.1
VPS13B-204ENST00000441350 TIMM17AQ99595 171 aa14.41□□□□□ -0.1
VPS13B-204ENST00000441350 CSDC2Q9Y534 153 aaKnown RBP14.41□□□□□ -0.1
VPS13B-204ENST00000441350 SMAGPQ0VAQ4 97 aa14.41□□□□□ -0.1
VPS13B-204ENST00000441350 WFDC10BQ8IUB3 73 aa14.41□□□□□ -0.1
VPS13B-204ENST00000441350 HSPB8Q9UJY1 196 aa14.41□□□□□ -0.1
VPS13B-204ENST00000441350 A0A1B0GUV1 79 aa14.4□□□□□ -0.1
VPS13B-204ENST00000441350 TMEM262E9PQX1 116 aa14.4□□□□□ -0.1
VPS13B-204ENST00000441350 C3orf84H3BNL1 204 aa14.4□□□□□ -0.1
VPS13B-204ENST00000441350 ATP5LO75964 103 aa14.4□□□□□ -0.1
VPS13B-204ENST00000441350 ZNF25P17030 456 aaPredicted RBP14.4□□□□□ -0.1
VPS13B-204ENST00000441350 TMEM141Q96I45 108 aa14.4□□□□□ -0.1
VPS13B-204ENST00000441350 NPSP0C0P6 89 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 PKIAP61925 76 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 MPV17L2Q567V2 206 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 CASC10Q5T4H9 136 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 AMMECR1LQ6DCA0 310 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 UPK3BQ9BT76 320 aa14.39□□□□□ -0.11
VPS13B-204ENST00000441350 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.38□□□□□ -0.11
VPS13B-204ENST00000441350 RBX1P62877 108 aa14.38□□□□□ -0.11
VPS13B-204ENST00000441350 IFI27L1Q96BM0 104 aa14.38□□□□□ -0.11
VPS13B-204ENST00000441350 OPRPNQ99935 248 aaPredicted RBP14.38□□□□□ -0.11
VPS13B-204ENST00000441350 IGLV4-3A0A075B6K6 122 aa14.37□□□□□ -0.11
VPS13B-204ENST00000441350 MRPS36P82909 103 aaKnown RBP14.37□□□□□ -0.11
VPS13B-204ENST00000441350 Q8N3U1 123 aa14.37□□□□□ -0.11
VPS13B-204ENST00000441350 IGLV4-60A0A075B6I1 120 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms