RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 CRYGAP11844 174 aa5.7□□□□□ -1.5
SMPD4-208ENST00000439029 CAMPP49913 170 aa5.7□□□□□ -1.5
SMPD4-208ENST00000439029 MEF2BQ02080 365 aaPredicted RBP5.7□□□□□ -1.5
SMPD4-208ENST00000439029 AMMECR1LQ6DCA0 310 aa5.7□□□□□ -1.5
SMPD4-208ENST00000439029 NUDT15Q9NV35 164 aa5.7□□□□□ -1.5
SMPD4-208ENST00000439029 HSPB11Q9Y547 144 aa5.7□□□□□ -1.5
SMPD4-208ENST00000439029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.69□□□□□ -1.5
SMPD4-208ENST00000439029 IGKV2-29A2NJV5 120 aaPredicted RBP5.69□□□□□ -1.5
SMPD4-208ENST00000439029 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
SMPD4-208ENST00000439029 CARHSP1Q9Y2V2 147 aaKnown RBP5.69□□□□□ -1.5
SMPD4-208ENST00000439029 A0A087X002 238 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 NOL3O60936 208 aaKnown RBP5.68□□□□□ -1.5
SMPD4-208ENST00000439029 APOMO95445 188 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 COTL1Q14019 142 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
SMPD4-208ENST00000439029 NUP35Q8NFH5 326 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 RPP21Q9H633 154 aaKnown RBP5.68□□□□□ -1.5
SMPD4-208ENST00000439029 TMEM167BQ9NRX6 74 aa5.68□□□□□ -1.5
SMPD4-208ENST00000439029 PLA2G10O15496 165 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 DEFA1P59665 94 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 CNPY1Q3B7I2 92 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 EIF5AL1Q6IS14 154 aaKnown RBP5.67□□□□□ -1.5
SMPD4-208ENST00000439029 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 CAMK2N2Q96S95 79 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 ZFP30Q9Y2G7 519 aa5.67□□□□□ -1.5
SMPD4-208ENST00000439029 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 A0A1W2PRE2 83 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 SNAI2O43623 268 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 CXorf1O96002 111 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 H2AFB2P0C5Z0 115 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 IL7P13232 177 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 UBE2G1P62253 170 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 UBE2BP63146 152 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 RASL11AQ6T310 242 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 COX8CQ7Z4L0 72 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 ISOC2Q96AB3 205 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 PGLYRP4Q96LB8 373 aa5.66□□□□□ -1.5
SMPD4-208ENST00000439029 LYRM1O43325 122 aa5.65□□□□□ -1.5
SMPD4-208ENST00000439029 Q6ZNX1 250 aa5.65□□□□□ -1.5
SMPD4-208ENST00000439029 TPPP3Q9BW30 176 aa5.65□□□□□ -1.5
SMPD4-208ENST00000439029 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
SMPD4-208ENST00000439029 BCL2L11O43521 198 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 OR5AL1P0C617 328 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 LINC00173Q6ZV60 143 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 PPP1R1CQ8WVI7 109 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 HIST1H2BAQ96A08 127 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 FMC1Q96HJ9 113 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 NIT2Q9NQR4 276 aa5.64□□□□□ -1.51
SMPD4-208ENST00000439029 FAM74A7A6NL05 159 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 LTAP01374 205 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 MALP21145 153 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 TSKUQ8WUA8 353 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 ACTR3CQ9C0K3 210 aaPredicted RBP5.63□□□□□ -1.51
SMPD4-208ENST00000439029 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
SMPD4-208ENST00000439029 NTF3P20783 257 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 ATP6V0CP27449 155 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 SS18Q15532 418 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 GAGE2EQ4V326 116 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 CD164L2Q6UWJ8 174 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 GAGE2DQ9UEU5 116 aa5.62□□□□□ -1.51
SMPD4-208ENST00000439029 CCDC160A6NGH7 325 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 M0QXV9 152 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 ZNF861PO60384 105 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 MPC2O95563 127 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 AKR1C3P42330 323 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 H2BFSP57053 126 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 ZNF726P1Q15940 193 aa5.61□□□□□ -1.51
SMPD4-208ENST00000439029 C19orf71A6NCJ1 209 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 APCSP02743 223 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 CXCL1P09341 107 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 ASB16-AS1Q495Z4 193 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 TMEM101Q96IK0 257 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 MED28Q9H204 178 aa5.6□□□□□ -1.51
SMPD4-208ENST00000439029 COX7A2LO14548 114 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 TSHBP01222 138 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 MT1HP80294 61 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 SPAG11BQ08648 103 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 RNF151Q2KHN1 245 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 CST9LP1Q5W188 147 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
SMPD4-208ENST00000439029 BTF3L4Q96K17 158 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 C2orf48Q96LS8 159 aa5.59□□□□□ -1.51
SMPD4-208ENST00000439029 FAM240BA0A1B0GVZ2 78 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 INMT-MINDY4F8WBC2 141 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 MBP02144 154 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 LINC00337Q8N6G1 96 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
SMPD4-208ENST00000439029 PSMG3Q9BT73 122 aaPredicted RBP5.58□□□□□ -1.52
SMPD4-208ENST00000439029 H7C423 109 aa5.57□□□□□ -1.52
SMPD4-208ENST00000439029 ZNF25P17030 456 aaPredicted RBP5.57□□□□□ -1.52
SMPD4-208ENST00000439029 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms