RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FAM19A3Q7Z5A8 133 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 PRNTQ86SH4 94 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SVBPQ8N300 66 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF664Q8N3J9 261 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00311Q8N616 119 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 NUP35Q8NFH5 326 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR13D1Q8NGV5 346 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 CIRBP-AS1Q8TBR5 109 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 SCGB1C1Q8TD33 95 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 GPR146Q96CH1 333 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 DNAJC30Q96LL9 226 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 CIB3Q96Q77 187 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 TP53RKQ96S44 253 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 HSPB9Q9BQS6 159 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 TXNDC17Q9BRA2 123 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 ADAT1Q9BUB4 502 aaKnown RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 CHCHD7Q9BUK0 85 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 MAP1LC3BQ9GZQ8 125 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 RNASE7Q9H1E1 156 aaKnown RBP1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 GTSF1LQ9H1H1 148 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 UQCC1Q9NVA1 299 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 GSKIPQ9P0R6 139 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 KAAG1Q9UBP8 84 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 JPT1Q9UK76 154 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAPPC2LQ9UL33 140 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 WASHC3Q9Y3C0 194 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 TIMM9Q9Y5J7 89 aa1.16□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV3OR15-7A0A075B7D8 119 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 A0A087WWC5 75 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRAV38-1A0A0B4J264 116 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 A0A1W2PRE2 83 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 hADV38S2A0JD32 116 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM24AA6NFZ4 105 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 B4DEV8 164 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 APOMO95445 188 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 HRASP01112 189 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LTAP01374 205 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV1-46P01743 117 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 APOC3P02656 99 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 RBP4P02753 201 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 MT-ND4LP03901 98 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TFF1P04155 84 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LINC00869P0C866 280 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 ATP6V0CP27449 155 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 DYNLT3P51808 116 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 FXYD4P59646 89 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 S100A10P60903 97 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 RAB2AP61019 212 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPL30P62888 115 aaKnown RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TNFAIP6P98066 277 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 MMDQ15546 238 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 KLK9Q2XQG4 91 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM155Q4W5P6 130 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 DNLZQ5SXM8 178 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM104BQ5XKR9 115 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 MORN3Q6PF18 240 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 HEPN1Q6WQI6 88 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 NTM-AS1Q6ZSK4 140 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF826PQ6ZT77 177 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 GOLT1AQ6ZVE7 132 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 SLC16A13Q7RTY0 426 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 SLC35E3Q7Z769 313 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 DAZ4Q86SG3 579 aaKnown RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM75Q8N9X5 138 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR5C1Q8NGR4 320 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR4A5Q8NH83 315 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 PLEKHB2Q96CS7 222 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 MALSU1Q96EH3 234 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LINC00052Q96N35 136 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 GAFA1Q96PS6 74 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LINC01587Q99440 93 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 RNF5Q99942 180 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 ANAPC13Q9BS18 74 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 PBDC1Q9BVG4 233 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 NKX6-2Q9C056 277 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 WDR61Q9GZS3 305 aaKnown RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 SLC35B3Q9H1N7 401 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 C11orf68Q9H3H3 251 aaKnown RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 SND1-IT1Q9HBX3 110 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 ENY2Q9NPA8 101 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 DAZ1Q9NQZ3 744 aaKnown RBP1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 SMCO4Q9NRQ5 59 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPRMQ9NS64 109 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM14BQ9NUH8 114 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM242Q9NWH2 141 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 FKBP11Q9NYL4 201 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 BET1LQ9NYM9 111 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LAMTOR3Q9UHA4 124 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 KLK9Q9UKQ9 250 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 LINC00312Q9Y6C7 94 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 S4R3C0 116 aa1.15□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRBV19A0A075B6N1 114 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRBV24-1A0A075B6N3 115 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 LOC102724200A0A096LPH7 203 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRGV10A0A0A0MS01 117 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM236DA0A1B0GTK5 79 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 CTXND1A0A1B0GTU2 59 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 C7orf77A4D0Y5 90 aa1.14□□□□□ -2.23
HMGB1P18-201ENST00000438801 A6NN06 94 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms