RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
TTC3-209ENST00000438055 RHODO00212 210 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
TTC3-209ENST00000438055 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 Q9UF83 564 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
TTC3-209ENST00000438055 M0R2P5 195 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 IGHV3-53P01767 116 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 LEPROTO15243 131 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 CFC1BP0CG36 223 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 CFC1P0CG37 223 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 UBE2D1P51668 147 aa12.29□□□□□ -0.44
TTC3-209ENST00000438055 A8MWV9 139 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 MUSTN1Q8IVN3 82 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 CUBNO60494 3623 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
TTC3-209ENST00000438055 TMEM223A0PJW6 202 aa12.27□□□□□ -0.44
TTC3-209ENST00000438055 TMEM238C9JI98 176 aa12.27□□□□□ -0.44
TTC3-209ENST00000438055 CHD6Q8TD26 2715 aa12.27□□□□□ -0.45
TTC3-209ENST00000438055 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 SPINK8P0C7L1 97 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 TCL1BO95988 128 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 STHQ8IWL8 128 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
TTC3-209ENST00000438055 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
TTC3-209ENST00000438055 A8MZ25 164 aa12.26□□□□□ -0.45
TTC3-209ENST00000438055 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
TTC3-209ENST00000438055 INSP01308 110 aa12.25□□□□□ -0.45
TTC3-209ENST00000438055 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
TTC3-209ENST00000438055 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
TTC3-209ENST00000438055 IGHV3-30-3P0DP02 117 aa12.25□□□□□ -0.45
TTC3-209ENST00000438055 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
TTC3-209ENST00000438055 Q6ZSN1 163 aa12.25□□□□□ -0.45
TTC3-209ENST00000438055 NDUFA12Q9UI09 145 aa12.24□□□□□ -0.45
TTC3-209ENST00000438055 C9JAW5 83 aa12.24□□□□□ -0.45
TTC3-209ENST00000438055 DEFB113Q30KQ7 82 aa12.24□□□□□ -0.45
TTC3-209ENST00000438055 BBC3Q96PG8 261 aaPredicted RBP12.23□□□□□ -0.45
TTC3-209ENST00000438055 A0A096LNT2 108 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 FOXI1Q12951 378 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
TTC3-209ENST00000438055 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 PRO0461Q9UI25 63 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 Q6ZUT4 128 aa12.22□□□□□ -0.45
TTC3-209ENST00000438055 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
TTC3-209ENST00000438055 A0A0J9YXY3 114 aa12.21□□□□□ -0.45
TTC3-209ENST00000438055 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.45
TTC3-209ENST00000438055 TRBV20-1A0A075B6N2 111 aa12.21□□□□□ -0.46
TTC3-209ENST00000438055 DEFB114Q30KQ6 69 aa12.2□□□□□ -0.46
TTC3-209ENST00000438055 DAND5Q8N907 189 aa12.2□□□□□ -0.46
TTC3-209ENST00000438055 FBN2P35556 2912 aa12.2□□□□□ -0.46
TTC3-209ENST00000438055 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
TTC3-209ENST00000438055 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
TTC3-209ENST00000438055 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.19□□□□□ -0.46
TTC3-209ENST00000438055 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
TTC3-209ENST00000438055 CIDEAO60543 219 aa12.19□□□□□ -0.46
TTC3-209ENST00000438055 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
TTC3-209ENST00000438055 NF1P21359 2839 aa12.19□□□□□ -0.46
TTC3-209ENST00000438055 AMELXQ99217 191 aa12.19□□□□□ -0.46
TTC3-209ENST00000438055 IGKV3OR2-268A0A0C4DH90 116 aa12.18□□□□□ -0.46
TTC3-209ENST00000438055 UBE2D3P61077 147 aa12.18□□□□□ -0.46
TTC3-209ENST00000438055 UBE2D2P62837 147 aa12.18□□□□□ -0.46
TTC3-209ENST00000438055 SLC25A20O43772 301 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 PPDPFLQ8WWR9 84 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 SPANXA1Q9NS26 97 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
TTC3-209ENST00000438055 GAGE12JA6NER3 117 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 GAGE4Q13068 117 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 GAGE5Q13069 117 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 TEN1Q86WV5 123 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 RPL35AP18077 110 aaKnown RBP12.16□□□□□ -0.46
TTC3-209ENST00000438055 Q6ZSV7 163 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 ANKRD29Q8N6D5 301 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 PYGO1Q9Y3Y4 419 aa12.16□□□□□ -0.46
TTC3-209ENST00000438055 HIST2H2BCQ6DN03 193 aa12.15□□□□□ -0.46
TTC3-209ENST00000438055 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
TTC3-209ENST00000438055 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
TTC3-209ENST00000438055 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
TTC3-209ENST00000438055 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.47
TTC3-209ENST00000438055 CCL24O00175 119 aa12.15□□□□□ -0.47
TTC3-209ENST00000438055 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.47
TTC3-209ENST00000438055 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.47
TTC3-209ENST00000438055 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.47
TTC3-209ENST00000438055 COX6CP09669 75 aa12.14□□□□□ -0.47
TTC3-209ENST00000438055 FSHBP01225 129 aa12.14□□□□□ -0.47
TTC3-209ENST00000438055 ODF3L2Q3SX64 289 aa12.14□□□□□ -0.47
TTC3-209ENST00000438055 MEIG1Q5JSS6 88 aa12.14□□□□□ -0.47
TTC3-209ENST00000438055 Q6ZTI0 123 aa12.13□□□□□ -0.47
TTC3-209ENST00000438055 ZNF843Q8N446 348 aa12.13□□□□□ -0.47
TTC3-209ENST00000438055 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms