RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DEFB104AQ8WTQ1 72 aa16.02■□□□□ 0.15
CPSF4-204ENST00000436336 A0A096LPF7 62 aa16.01■□□□□ 0.15
CPSF4-204ENST00000436336 HIST3H2BBQ8N257 126 aa16.01■□□□□ 0.15
CPSF4-204ENST00000436336 PDZD11Q5EBL8 140 aa16■□□□□ 0.15
CPSF4-204ENST00000436336 IGHV1-24A0A0C4DH33 117 aa15.99■□□□□ 0.15
CPSF4-204ENST00000436336 FAM19A2Q8N3H0 131 aa15.99■□□□□ 0.15
CPSF4-204ENST00000436336 GTSF1LQ9H1H1 148 aa15.99■□□□□ 0.15
CPSF4-204ENST00000436336 PMCHL1Q16048 86 aa15.99■□□□□ 0.15
CPSF4-204ENST00000436336 TMEM97Q5BJF2 176 aa15.99■□□□□ 0.15
CPSF4-204ENST00000436336 NUDT3O95989 172 aa15.98■□□□□ 0.15
CPSF4-204ENST00000436336 AMTP48728 403 aa15.98■□□□□ 0.15
CPSF4-204ENST00000436336 HBDP02042 147 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 G0S2P27469 103 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 S100A2P29034 98 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 A0A096LNJ9 63 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 NTM-AS1Q6ZSK4 140 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 C15orf53Q8NAA6 179 aa15.97■□□□□ 0.15
CPSF4-204ENST00000436336 BTF3P20290 206 aaKnown RBP15.95■□□□□ 0.14
CPSF4-204ENST00000436336 TMEM18Q96B42 140 aa15.95■□□□□ 0.14
CPSF4-204ENST00000436336 CHCHD7Q9BUK0 85 aa15.95■□□□□ 0.14
CPSF4-204ENST00000436336 C20orf203Q8NBC4 194 aa15.94■□□□□ 0.14
CPSF4-204ENST00000436336 PACRGQ96M98 296 aaPredicted RBP15.94■□□□□ 0.14
CPSF4-204ENST00000436336 TRBV6-8A0A0A6YYG3 113 aa15.94■□□□□ 0.14
CPSF4-204ENST00000436336 TRBV25-1A0A075B6N4 114 aa15.93■□□□□ 0.14
CPSF4-204ENST00000436336 IGLL5B9A064 214 aa15.93■□□□□ 0.14
CPSF4-204ENST00000436336 C2orf66Q6UXQ4 117 aa15.93■□□□□ 0.14
CPSF4-204ENST00000436336 LINC01549A6NIU2 74 aa15.92■□□□□ 0.14
CPSF4-204ENST00000436336 TOMM6Q96B49 74 aa15.92■□□□□ 0.14
CPSF4-204ENST00000436336 HIST1H2BLQ99880 126 aa15.92■□□□□ 0.14
CPSF4-204ENST00000436336 CYSLTR1Q9Y271 337 aa15.92■□□□□ 0.14
CPSF4-204ENST00000436336 IFITM10A6NMD0 228 aa15.91■□□□□ 0.14
CPSF4-204ENST00000436336 CEMP1Q6PRD7 247 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-204ENST00000436336 NUPR2A6NF83 97 aa15.91■□□□□ 0.14
CPSF4-204ENST00000436336 LEPROTL1O95214 131 aa15.91■□□□□ 0.14
CPSF4-204ENST00000436336 FABP4P15090 132 aa15.9■□□□□ 0.14
CPSF4-204ENST00000436336 TIRAPP58753 221 aa15.9■□□□□ 0.14
CPSF4-204ENST00000436336 LYPD5Q6UWN5 251 aa15.9■□□□□ 0.14
CPSF4-204ENST00000436336 TMEM243Q9BU79 118 aa15.9■□□□□ 0.14
CPSF4-204ENST00000436336 RPL39P62891 51 aaKnown RBP15.89■□□□□ 0.13
CPSF4-204ENST00000436336 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.88■□□□□ 0.13
CPSF4-204ENST00000436336 IGKV2-29A2NJV5 120 aaPredicted RBP15.88■□□□□ 0.13
CPSF4-204ENST00000436336 H7C423 109 aa15.87■□□□□ 0.13
CPSF4-204ENST00000436336 LELP1Q5T871 98 aa15.87■□□□□ 0.13
CPSF4-204ENST00000436336 HSPB8Q9UJY1 196 aa15.87■□□□□ 0.13
CPSF4-204ENST00000436336 KLK5Q9Y337 293 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-204ENST00000436336 UBE2L6O14933 153 aa15.86■□□□□ 0.13
CPSF4-204ENST00000436336 DYNC2H1Q8NCM8 4307 aaKnown RBP15.86■□□□□ 0.13
CPSF4-204ENST00000436336 DNAH7Q8WXX0 4024 aa15.86■□□□□ 0.13
CPSF4-204ENST00000436336 SCGB3A1Q96QR1 104 aa15.85■□□□□ 0.13
CPSF4-204ENST00000436336 ERASQ7Z444 233 aa15.85■□□□□ 0.13
CPSF4-204ENST00000436336 CHCHD5Q9BSY4 110 aa15.85■□□□□ 0.13
CPSF4-204ENST00000436336 ATP5LO75964 103 aa15.84■□□□□ 0.13
CPSF4-204ENST00000436336 ESRGQ1W209 222 aa15.84■□□□□ 0.13
CPSF4-204ENST00000436336 LINC00173Q6ZV60 143 aa15.84■□□□□ 0.13
CPSF4-204ENST00000436336 UBE2D4Q9Y2X8 147 aa15.84■□□□□ 0.13
CPSF4-204ENST00000436336 IGIPA6NJ69 53 aa15.83■□□□□ 0.13
CPSF4-204ENST00000436336 SMAGPQ0VAQ4 97 aa15.83■□□□□ 0.13
CPSF4-204ENST00000436336 WWC2-AS2Q96NR7 200 aa15.83■□□□□ 0.13
CPSF4-204ENST00000436336 TIMM17AQ99595 171 aa15.83■□□□□ 0.13
CPSF4-204ENST00000436336 PYGO1Q9Y3Y4 419 aa15.83■□□□□ 0.13
CPSF4-204ENST00000436336 TIMM21Q9BVV7 248 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 SPANXA1Q9NS26 97 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 APLNQ9ULZ1 77 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-204ENST00000436336 TCTAP57738 103 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 MRPL52Q86TS9 123 aaKnown RBP15.82■□□□□ 0.12
CPSF4-204ENST00000436336 IFI27L1Q96BM0 104 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 TMEM141Q96I45 108 aa15.82■□□□□ 0.12
CPSF4-204ENST00000436336 FGF6P10767 208 aa15.81■□□□□ 0.12
CPSF4-204ENST00000436336 GAGE6Q13070 117 aa15.81■□□□□ 0.12
CPSF4-204ENST00000436336 TRAV8-6A0A0B4J262 113 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 MUC7Q8TAX7 377 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 CSDC2Q9Y534 153 aaKnown RBP15.8■□□□□ 0.12
CPSF4-204ENST00000436336 NPSP0C0P6 89 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 AMMECR1LQ6DCA0 310 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 OR10D4PQ8NGN7 298 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 MAP1LC3CQ9BXW4 147 aa15.8■□□□□ 0.12
CPSF4-204ENST00000436336 LOC105371267A0A1B0GV96 52 aa15.79■□□□□ 0.12
CPSF4-204ENST00000436336 ZNF25P17030 456 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-204ENST00000436336 TGP01266 2768 aa15.78■□□□□ 0.12
CPSF4-204ENST00000436336 CCL18P55774 89 aa15.78■□□□□ 0.12
CPSF4-204ENST00000436336 PKIAP61925 76 aa15.78■□□□□ 0.12
CPSF4-204ENST00000436336 DGAT2L7PQ6IED9 249 aa15.78■□□□□ 0.12
CPSF4-204ENST00000436336 Q6ZN92 141 aa15.78■□□□□ 0.12
CPSF4-204ENST00000436336 TMEM262E9PQX1 116 aa15.77■□□□□ 0.12
CPSF4-204ENST00000436336 CSMD3Q7Z407 3707 aa15.77■□□□□ 0.12
CPSF4-204ENST00000436336 C3orf79P0CE67 100 aa15.77■□□□□ 0.11
CPSF4-204ENST00000436336 KRTDAPP60985 99 aa15.77■□□□□ 0.11
CPSF4-204ENST00000436336 ZFAND6Q6FIF0 208 aa15.77■□□□□ 0.11
CPSF4-204ENST00000436336 TMEM101Q96IK0 257 aa15.77■□□□□ 0.11
CPSF4-204ENST00000436336 IGLV4-3A0A075B6K6 122 aa15.76■□□□□ 0.11
CPSF4-204ENST00000436336 MRPS36P82909 103 aaKnown RBP15.76■□□□□ 0.11
CPSF4-204ENST00000436336 PAPPA-AS1Q5QFB9 102 aa15.76■□□□□ 0.11
CPSF4-204ENST00000436336 A0A1B0GUV1 79 aa15.75■□□□□ 0.11
CPSF4-204ENST00000436336 OR5A1Q8NGJ0 315 aa15.75■□□□□ 0.11
CPSF4-204ENST00000436336 BAALCQ8WXS3 180 aa15.75■□□□□ 0.11
CPSF4-204ENST00000436336 FAM104AQ969W3 186 aa15.75■□□□□ 0.11
CPSF4-204ENST00000436336 OPRPNQ99935 248 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-204ENST00000436336 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
CPSF4-204ENST00000436336 LINC00588Q9Y4M8 146 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms