RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZNF256Q9Y2P7 627 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 PRM2P04554 102 aa7.7□□□□□ -1.18
CLSTN1-203ENST00000435891 UBR5O95071 2799 aaPredicted RBP7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 CHD6Q8TD26 2715 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 NIPBLQ6KC79 2804 aaeCLIP7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 FAM236AA0A1B0GUQ0 79 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 FAM236BA0A1B0GV22 79 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 PMVKQ15126 192 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 DEFB136Q30KP8 78 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 C9orf85Q96MD7 179 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 KLK5Q9Y337 293 aaPredicted RBP7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 NDUFA11Q86Y39 141 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 OPRPNQ99935 248 aaPredicted RBP7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 TMEM170BQ5T4T1 132 aa7.69□□□□□ -1.18
CLSTN1-203ENST00000435891 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 COX6B1P14854 86 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 HOXD3P31249 432 aaPredicted RBP7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 PRO1854Q9UHT4 67 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 PPP1R17O96001 155 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 KRTAP10-9P60411 292 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 SETD2Q9BYW2 2564 aaPredicted RBP7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 ZNF702PQ9H963 129 aa7.68□□□□□ -1.18
CLSTN1-203ENST00000435891 H3BMM0 161 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 M0QY20 66 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 LGALS9O00182 355 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 PRSS2P07478 247 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 UBE2WQ96B02 151 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 APCP25054 2843 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 VCYO14598 125 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 HTN1P15515 57 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 IGHV1OR15-1A0A075B7D0 117 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 TRBV27A0A0K0K1C4 114 aa7.67□□□□□ -1.18
CLSTN1-203ENST00000435891 TRGV11A0A075B6L2 103 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 KNCNA6PVL3 124 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 SLURP1P55000 103 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 CR1P17927 2039 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 NOTCH3Q9UM47 2321 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 DSCR9P59020 149 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 P0DMU3 169 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 UBE2D3P61077 147 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 UBE2D2P62837 147 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 BBC3Q96PG8 261 aaPredicted RBP7.66□□□□□ -1.18
CLSTN1-203ENST00000435891 PROK1P58294 105 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 HERVK_113P63121 156 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 ODF3Q96PU9 254 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 Q9UF83 564 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 WNK1Q9H4A3 2382 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 CCDC168Q8NDH2 2452 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.18
CLSTN1-203ENST00000435891 DNAJC30Q96LL9 226 aa7.65□□□□□ -1.19
CLSTN1-203ENST00000435891 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 CFC1P0CG37 223 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 Q6YL49 198 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 TMEM101Q96IK0 257 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 PRRC2AP48634 2157 aaKnown RBP7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 J3KT08 172 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 ATXN8Q156A1 80 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 LINC01620Q4KN68 170 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 TMEM89A2RUT3 159 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 LINC01619G3V211 115 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 FSHBP01225 129 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 IGHV4-31P0DP07 118 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 LGALS3P17931 250 aaKnown RBP7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 UBE2D1P51668 147 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 TIMM17AQ99595 171 aa7.64□□□□□ -1.19
CLSTN1-203ENST00000435891 A4D1N5 150 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 DEFB131AP59861 70 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 ITPR3Q14573 2671 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 ELANEP08246 267 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 A0A0J9YY99 117 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 J3QLI3 93 aa7.63□□□□□ -1.19
CLSTN1-203ENST00000435891 TMEM141Q96I45 108 aa7.62□□□□□ -1.19
CLSTN1-203ENST00000435891 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
CLSTN1-203ENST00000435891 RS1O15537 224 aa7.62□□□□□ -1.19
CLSTN1-203ENST00000435891 AMELXQ99217 191 aa7.62□□□□□ -1.19
CLSTN1-203ENST00000435891 NDUFA7O95182 113 aa7.62□□□□□ -1.19
CLSTN1-203ENST00000435891 NPC2P61916 151 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms