RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
HERC3-206ENST00000431413 RPP21Q9H633 154 aaKnown RBP9.82□□□□□ -0.84
HERC3-206ENST00000431413 AMTP48728 403 aa9.81□□□□□ -0.84
HERC3-206ENST00000431413 KRTAP26-1Q6PEX3 210 aa9.81□□□□□ -0.84
HERC3-206ENST00000431413 C20orf203Q8NBC4 194 aa9.81□□□□□ -0.84
HERC3-206ENST00000431413 CNFNQ9BYD5 112 aa9.81□□□□□ -0.84
HERC3-206ENST00000431413 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
HERC3-206ENST00000431413 AP5S1Q9NUS5 200 aa9.8□□□□□ -0.84
HERC3-206ENST00000431413 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
HERC3-206ENST00000431413 hDV102S1A0JD36 115 aa9.79□□□□□ -0.84
HERC3-206ENST00000431413 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
HERC3-206ENST00000431413 TEX261Q6UWH6 196 aa9.79□□□□□ -0.84
HERC3-206ENST00000431413 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
HERC3-206ENST00000431413 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
HERC3-206ENST00000431413 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
HERC3-206ENST00000431413 K7EN84 100 aa9.77□□□□□ -0.85
HERC3-206ENST00000431413 RPL37AP61513 92 aaKnown RBP9.77□□□□□ -0.85
HERC3-206ENST00000431413 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
HERC3-206ENST00000431413 AKAP14Q86UN6 197 aa9.77□□□□□ -0.85
HERC3-206ENST00000431413 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
HERC3-206ENST00000431413 A8MWL6 223 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
HERC3-206ENST00000431413 NCR2O95944 276 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 OXTP01178 125 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
HERC3-206ENST00000431413 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 CFAP161Q6P656 301 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
HERC3-206ENST00000431413 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 TRAV26-2A0A0B4J265 109 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 FAM231DQ6ZW35 169 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 BORCS7Q96B45 105 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 DPH3Q96FX2 82 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
HERC3-206ENST00000431413 H7C423 109 aa9.74□□□□□ -0.85
HERC3-206ENST00000431413 ALKAL2Q6UX46 152 aa9.74□□□□□ -0.85
HERC3-206ENST00000431413 Q6ZNX1 250 aa9.74□□□□□ -0.85
HERC3-206ENST00000431413 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
HERC3-206ENST00000431413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.74□□□□□ -0.85
HERC3-206ENST00000431413 IGKV3OR2-268A0A0C4DH90 116 aa9.73□□□□□ -0.85
HERC3-206ENST00000431413 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
HERC3-206ENST00000431413 APCSP02743 223 aa9.73□□□□□ -0.85
HERC3-206ENST00000431413 CEBPGP53567 150 aa9.73□□□□□ -0.85
HERC3-206ENST00000431413 CT83Q5H943 113 aa9.73□□□□□ -0.85
HERC3-206ENST00000431413 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
HERC3-206ENST00000431413 GAGE12HA6NDE8 117 aa9.72□□□□□ -0.85
HERC3-206ENST00000431413 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
HERC3-206ENST00000431413 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
HERC3-206ENST00000431413 PMCHP20382 165 aa9.71□□□□□ -0.86
HERC3-206ENST00000431413 FOXA3P55318 350 aaPredicted RBP9.71□□□□□ -0.86
HERC3-206ENST00000431413 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.86
HERC3-206ENST00000431413 RNF185Q96GF1 192 aa9.71□□□□□ -0.86
HERC3-206ENST00000431413 BTF3L4Q96K17 158 aa9.71□□□□□ -0.86
HERC3-206ENST00000431413 FAM210AQ96ND0 272 aa9.71□□□□□ -0.86
HERC3-206ENST00000431413 EIF5A2Q9GZV4 153 aaKnown RBP9.71□□□□□ -0.86
HERC3-206ENST00000431413 I3L3M4 83 aa9.7□□□□□ -0.86
HERC3-206ENST00000431413 FGF6P10767 208 aa9.7□□□□□ -0.86
HERC3-206ENST00000431413 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
HERC3-206ENST00000431413 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
HERC3-206ENST00000431413 TMEM101Q96IK0 257 aa9.7□□□□□ -0.86
HERC3-206ENST00000431413 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
HERC3-206ENST00000431413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
HERC3-206ENST00000431413 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
HERC3-206ENST00000431413 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
HERC3-206ENST00000431413 PANO1I0J062 215 aa9.69□□□□□ -0.86
HERC3-206ENST00000431413 NDUFS6O75380 124 aaKnown RBP9.69□□□□□ -0.86
HERC3-206ENST00000431413 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
HERC3-206ENST00000431413 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
HERC3-206ENST00000431413 hCG_2014768A0A024R1R8 64 aa9.68□□□□□ -0.86
HERC3-206ENST00000431413 A0A1B0GUT8 65 aa9.68□□□□□ -0.86
HERC3-206ENST00000431413 FAM231BA6NCW3 169 aa9.68□□□□□ -0.86
HERC3-206ENST00000431413 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
HERC3-206ENST00000431413 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
HERC3-206ENST00000431413 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
HERC3-206ENST00000431413 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 HIGD1CA8MV81 97 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 SLPIP03973 132 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 OR5A1Q8NGJ0 315 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 TMEM191AQ9H0A3 160 aa9.67□□□□□ -0.86
HERC3-206ENST00000431413 A0A087WYN8 130 aa9.66□□□□□ -0.86
HERC3-206ENST00000431413 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
HERC3-206ENST00000431413 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
HERC3-206ENST00000431413 OSTCQ9NRP0 149 aa9.66□□□□□ -0.86
HERC3-206ENST00000431413 CHTF8P0CG12 524 aa9.65□□□□□ -0.86
HERC3-206ENST00000431413 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.86
HERC3-206ENST00000431413 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
HERC3-206ENST00000431413 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
HERC3-206ENST00000431413 PPP1R17O96001 155 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 ESDP10768 282 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 XCL1P47992 114 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 COX6A2Q02221 97 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 RIGQ13278 110 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 TMEM242Q9NWH2 141 aa9.64□□□□□ -0.87
HERC3-206ENST00000431413 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
HERC3-206ENST00000431413 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
HERC3-206ENST00000431413 TSHBP01222 138 aa9.63□□□□□ -0.87
HERC3-206ENST00000431413 RAB4AP20338 218 aa9.63□□□□□ -0.87
HERC3-206ENST00000431413 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms