RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 TWIST1Q15672 202 aa17.6■□□□□ 0.41
LMO1-202ENST00000428101 DGAT2L7PQ6IED9 249 aa17.6■□□□□ 0.41
LMO1-202ENST00000428101 GFRA4Q9GZZ7 299 aa17.6■□□□□ 0.41
LMO1-202ENST00000428101 IGLV10-54A0A075B6I4 117 aa17.59■□□□□ 0.41
LMO1-202ENST00000428101 BLOC1S1P78537 153 aa17.58■□□□□ 0.4
LMO1-202ENST00000428101 C9orf163Q8N9P6 203 aa17.58■□□□□ 0.4
LMO1-202ENST00000428101 J3QL48 77 aa17.57■□□□□ 0.4
LMO1-202ENST00000428101 GATD1Q8NB37 220 aa17.57■□□□□ 0.4
LMO1-202ENST00000428101 GTSF1Q8WW33 167 aa17.57■□□□□ 0.4
LMO1-202ENST00000428101 TRAV8-4A0A0B4J246 113 aa17.55■□□□□ 0.4
LMO1-202ENST00000428101 TRAV26-2A0A0B4J265 109 aa17.55■□□□□ 0.4
LMO1-202ENST00000428101 KRTAP29-1A8MX34 341 aaPredicted RBP17.55■□□□□ 0.4
LMO1-202ENST00000428101 COTL1Q14019 142 aa17.55■□□□□ 0.4
LMO1-202ENST00000428101 LRP1Q07954 4544 aaKnown RBP17.54■□□□□ 0.4
LMO1-202ENST00000428101 CLRN3Q8NCR9 226 aa17.54■□□□□ 0.4
LMO1-202ENST00000428101 LYPD6BQ8NI32 183 aa17.54■□□□□ 0.4
LMO1-202ENST00000428101 TMEM250H0YL14 139 aa17.53■□□□□ 0.4
LMO1-202ENST00000428101 AMTP48728 403 aa17.53■□□□□ 0.4
LMO1-202ENST00000428101 FOXA3P55318 350 aaPredicted RBP17.53■□□□□ 0.4
LMO1-202ENST00000428101 UBE2L6O14933 153 aa17.52■□□□□ 0.4
LMO1-202ENST00000428101 RPL39LQ96EH5 51 aaKnown RBP17.51■□□□□ 0.39
LMO1-202ENST00000428101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.51■□□□□ 0.39
LMO1-202ENST00000428101 SDIM1Q6ZPB5 146 aa17.5■□□□□ 0.39
LMO1-202ENST00000428101 FAM231DQ6ZW35 169 aa17.5■□□□□ 0.39
LMO1-202ENST00000428101 PANO1I0J062 215 aa17.49■□□□□ 0.39
LMO1-202ENST00000428101 GATCO43716 136 aaKnown RBP17.49■□□□□ 0.39
LMO1-202ENST00000428101 CNBPP62633 177 aaKnown RBP17.49■□□□□ 0.39
LMO1-202ENST00000428101 hDV102S1A0JD36 115 aa17.48■□□□□ 0.39
LMO1-202ENST00000428101 A8MWL6 223 aa17.46■□□□□ 0.39
LMO1-202ENST00000428101 SLPIP03973 132 aa17.46■□□□□ 0.39
LMO1-202ENST00000428101 SMIM15Q7Z3B0 74 aa17.46■□□□□ 0.39
LMO1-202ENST00000428101 FAT3Q8TDW7 4589 aa17.46■□□□□ 0.39
LMO1-202ENST00000428101 CEBPGP53567 150 aa17.45■□□□□ 0.38
LMO1-202ENST00000428101 NCR2O95944 276 aa17.44■□□□□ 0.38
LMO1-202ENST00000428101 PKHD1L1Q86WI1 4243 aa17.43■□□□□ 0.38
LMO1-202ENST00000428101 RPL37AP61513 92 aaKnown RBP17.43■□□□□ 0.38
LMO1-202ENST00000428101 CT83Q5H943 113 aa17.43■□□□□ 0.38
LMO1-202ENST00000428101 TEX261Q6UWH6 196 aa17.43■□□□□ 0.38
LMO1-202ENST00000428101 SDHAF1A6NFY7 115 aa17.42■□□□□ 0.38
LMO1-202ENST00000428101 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.41■□□□□ 0.38
LMO1-202ENST00000428101 IGKV2-29A2NJV5 120 aaPredicted RBP17.41■□□□□ 0.38
LMO1-202ENST00000428101 CIRBPQ14011 172 aaKnown RBP17.41■□□□□ 0.38
LMO1-202ENST00000428101 IGKV3OR2-268A0A0C4DH90 116 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 GAGE12HA6NDE8 117 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 GAS8-AS1O95177 125 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 APCSP02743 223 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 LINC01551Q86U37 167 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 C15orf56Q8N910 161 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 AP5S1Q9NUS5 200 aa17.4■□□□□ 0.38
LMO1-202ENST00000428101 H7C423 109 aa17.39■□□□□ 0.37
LMO1-202ENST00000428101 NDUFS6O75380 124 aaKnown RBP17.39■□□□□ 0.37
LMO1-202ENST00000428101 AMMECR1LQ6DCA0 310 aa17.39■□□□□ 0.37
LMO1-202ENST00000428101 SMIM7Q9BQ49 75 aa17.39■□□□□ 0.37
LMO1-202ENST00000428101 EIF5A2Q9GZV4 153 aaKnown RBP17.39■□□□□ 0.37
LMO1-202ENST00000428101 IGHV3-64A0A075B6Q5 118 aa17.38■□□□□ 0.37
LMO1-202ENST00000428101 TRBV6-5A0A0K0K1A5 114 aa17.38■□□□□ 0.37
LMO1-202ENST00000428101 FAM231BA6NCW3 169 aa17.38■□□□□ 0.37
LMO1-202ENST00000428101 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.37■□□□□ 0.37
LMO1-202ENST00000428101 OXTP01178 125 aa17.37■□□□□ 0.37
LMO1-202ENST00000428101 FGF6P10767 208 aa17.37■□□□□ 0.37
LMO1-202ENST00000428101 HNRNPA3P51991 378 aaKnown RBP17.37■□□□□ 0.37
LMO1-202ENST00000428101 RNASEKQ6P5S7 137 aaKnown RBP17.37■□□□□ 0.37
LMO1-202ENST00000428101 TSKUQ8WUA8 353 aa17.37■□□□□ 0.37
LMO1-202ENST00000428101 FAM210AQ96ND0 272 aa17.37■□□□□ 0.37
LMO1-202ENST00000428101 HIGD1CA8MV81 97 aa17.36■□□□□ 0.37
LMO1-202ENST00000428101 I3L3M4 83 aa17.36■□□□□ 0.37
LMO1-202ENST00000428101 CHCHD10Q8WYQ3 142 aaPredicted RBP17.36■□□□□ 0.37
LMO1-202ENST00000428101 A0A1B0GUT8 65 aa17.35■□□□□ 0.37
LMO1-202ENST00000428101 SRP19P09132 144 aaKnown RBP17.35■□□□□ 0.37
LMO1-202ENST00000428101 PMCHP20382 165 aa17.35■□□□□ 0.37
LMO1-202ENST00000428101 CFAP161Q6P656 301 aa17.35■□□□□ 0.37
LMO1-202ENST00000428101 BORCS7Q96B45 105 aa17.35■□□□□ 0.37
LMO1-202ENST00000428101 ZNF727A8MUV8 499 aa17.34■□□□□ 0.37
LMO1-202ENST00000428101 RNF185Q96GF1 192 aa17.34■□□□□ 0.37
LMO1-202ENST00000428101 TMEM191AQ9H0A3 160 aa17.34■□□□□ 0.37
LMO1-202ENST00000428101 OSTCQ9NRP0 149 aa17.34■□□□□ 0.37
LMO1-202ENST00000428101 CHTF8P0CG12 524 aa17.33■□□□□ 0.36
LMO1-202ENST00000428101 TSHBP01222 138 aa17.32■□□□□ 0.36
LMO1-202ENST00000428101 ESDP10768 282 aa17.32■□□□□ 0.36
LMO1-202ENST00000428101 ZNF25P17030 456 aaPredicted RBP17.32■□□□□ 0.36
LMO1-202ENST00000428101 ST20Q9HBF5 79 aa17.32■□□□□ 0.36
LMO1-202ENST00000428101 RAB4AP20338 218 aa17.31■□□□□ 0.36
LMO1-202ENST00000428101 RPS10P46783 165 aaKnown RBP17.31■□□□□ 0.36
LMO1-202ENST00000428101 HIGD2BQ4VC39 106 aa17.31■□□□□ 0.36
LMO1-202ENST00000428101 SPACA4Q8TDM5 124 aa17.31■□□□□ 0.36
LMO1-202ENST00000428101 A0A087WYN8 130 aa17.3■□□□□ 0.36
LMO1-202ENST00000428101 POLR2KP53803 58 aaKnown RBP17.3■□□□□ 0.36
LMO1-202ENST00000428101 FOXI1Q12951 378 aa17.3■□□□□ 0.36
LMO1-202ENST00000428101 OR5A1Q8NGJ0 315 aa17.3■□□□□ 0.36
LMO1-202ENST00000428101 TMEM242Q9NWH2 141 aa17.3■□□□□ 0.36
LMO1-202ENST00000428101 V9GYV3 84 aa17.3■□□□□ 0.36
LMO1-202ENST00000428101 AMN1Q8IY45 258 aa17.29■□□□□ 0.36
LMO1-202ENST00000428101 DPH3Q96FX2 82 aa17.29■□□□□ 0.36
LMO1-202ENST00000428101 GVQW2A0A096LPI5 108 aaPredicted RBP17.27■□□□□ 0.36
LMO1-202ENST00000428101 MRAP2Q96G30 205 aa17.27■□□□□ 0.36
LMO1-202ENST00000428101 BTF3L4Q96K17 158 aa17.27■□□□□ 0.36
LMO1-202ENST00000428101 TRBV27A0A0K0K1C4 114 aa17.26■□□□□ 0.35
LMO1-202ENST00000428101 COX6A2Q02221 97 aa17.26■□□□□ 0.35
LMO1-202ENST00000428101 NUP35Q8NFH5 326 aa17.26■□□□□ 0.35
LMO1-202ENST00000428101 TMEM101Q96IK0 257 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms