RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 GAGE1Q13065 139 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 GAGE4Q13068 117 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 GAGE5Q13069 117 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 COTL1Q14019 142 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 GAGE13Q4V321 117 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 ATP6V0E2Q8NHE4 81 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 TMEM18Q96B42 140 aa7.25□□□□□ -1.25
MDC1-205ENST00000425072 A0A0J9YY99 117 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 NUDT3O95989 172 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 VSIG2Q96IQ7 327 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 PACRGQ96M98 296 aaPredicted RBP7.24□□□□□ -1.25
MDC1-205ENST00000425072 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
MDC1-205ENST00000425072 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
MDC1-205ENST00000425072 NUPR1O60356 82 aa7.23□□□□□ -1.25
MDC1-205ENST00000425072 NEGR1Q7Z3B1 354 aa7.23□□□□□ -1.25
MDC1-205ENST00000425072 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
MDC1-205ENST00000425072 Q9UF83 564 aa7.23□□□□□ -1.25
MDC1-205ENST00000425072 AMTP48728 403 aa7.22□□□□□ -1.25
MDC1-205ENST00000425072 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
MDC1-205ENST00000425072 C15orf53Q8NAA6 179 aa7.22□□□□□ -1.25
MDC1-205ENST00000425072 PHLDA1Q8WV24 401 aaPredicted RBP7.22□□□□□ -1.25
MDC1-205ENST00000425072 TRBV25-1A0A075B6N4 114 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 LEPROTL1O95214 131 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 TSHBP01222 138 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 HBDP02042 147 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 BTF3P20290 206 aaKnown RBP7.21□□□□□ -1.26
MDC1-205ENST00000425072 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 HSPB8Q9UJY1 196 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
MDC1-205ENST00000425072 IGHV1-24A0A0C4DH33 117 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 IGHV3-38A0A0C4DH36 116 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 H7C423 109 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 ATP5LO75964 103 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 LINC00310P59036 64 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 C20orf203Q8NBC4 194 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 CYSLTR1Q9Y271 337 aa7.2□□□□□ -1.26
MDC1-205ENST00000425072 A0A096LPF7 62 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 LINC00694P0DN24 101 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 FABP4P15090 132 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 TIRAPP58753 221 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 PKIAP61925 76 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 PAPPA-AS1Q5QFB9 102 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 C2orf66Q6UXQ4 117 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 TMEM243Q9BU79 118 aa7.19□□□□□ -1.26
MDC1-205ENST00000425072 KLK5Q9Y337 293 aaPredicted RBP7.19□□□□□ -1.26
MDC1-205ENST00000425072 IGLL5B9A064 214 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
MDC1-205ENST00000425072 UBE2L6O14933 153 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 NPSP0C0P6 89 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 TCTAP57738 103 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
MDC1-205ENST00000425072 LYPD5Q6UWN5 251 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 ERASQ7Z444 233 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 TMEM141Q96I45 108 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 PYGO1Q9Y3Y4 419 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
MDC1-205ENST00000425072 TRAV8-6A0A0B4J262 113 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 NUPR2A6NF83 97 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 LELP1Q5T871 98 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 NTM-AS1Q6ZSK4 140 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 CHCHD7Q9BUK0 85 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 MAP1LC3CQ9BXW4 147 aa7.17□□□□□ -1.26
MDC1-205ENST00000425072 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 PRSS1P07477 247 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 CCL18P55774 89 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 AMMECR1LQ6DCA0 310 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 Q6ZN92 141 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 DEFB104AQ8WTQ1 72 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 TMEM101Q96IK0 257 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 TIMM17AQ99595 171 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 CHCHD5Q9BSY4 110 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 SPANXA1Q9NS26 97 aa7.16□□□□□ -1.26
MDC1-205ENST00000425072 CSDC2Q9Y534 153 aaKnown RBP7.16□□□□□ -1.26
MDC1-205ENST00000425072 A0A096LNJ9 63 aa7.15□□□□□ -1.26
MDC1-205ENST00000425072 IGIPA6NJ69 53 aa7.15□□□□□ -1.26
MDC1-205ENST00000425072 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.26
MDC1-205ENST00000425072 AKR1D1P51857 326 aa7.15□□□□□ -1.26
MDC1-205ENST00000425072 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.26
MDC1-205ENST00000425072 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
MDC1-205ENST00000425072 RPL39P62891 51 aaKnown RBP7.14□□□□□ -1.27
MDC1-205ENST00000425072 ESRGQ1W209 222 aa7.14□□□□□ -1.27
MDC1-205ENST00000425072 SPATA12Q7Z6I5 190 aa7.14□□□□□ -1.27
MDC1-205ENST00000425072 OR10D4PQ8NGN7 298 aa7.14□□□□□ -1.27
MDC1-205ENST00000425072 VCX2Q9H322 139 aa7.14□□□□□ -1.27
MDC1-205ENST00000425072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
MDC1-205ENST00000425072 A0A087WX48 190 aa7.13□□□□□ -1.27
MDC1-205ENST00000425072 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms