RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 DAZAP1Q96EP5 407 aaKnown RBP6.18□□□□□ -1.42
NUP50-205ENST00000419387 C1orf43Q9BWL3 253 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 CNFNQ9BYD5 112 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
NUP50-205ENST00000419387 BIN3Q9NQY0 253 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 V9GYV3 84 aa6.18□□□□□ -1.42
NUP50-205ENST00000419387 CRPP02741 224 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 ANGP03950 147 aaKnown RBP6.17□□□□□ -1.42
NUP50-205ENST00000419387 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
NUP50-205ENST00000419387 ADCYAP1P18509 176 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 CTRLP40313 264 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
NUP50-205ENST00000419387 MPV17L2Q567V2 206 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 NTM-AS1Q6ZSK4 140 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 CHCHD5Q9BSY4 110 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 NAT8Q9UHE5 227 aa6.17□□□□□ -1.42
NUP50-205ENST00000419387 GATCO43716 136 aaKnown RBP6.16□□□□□ -1.42
NUP50-205ENST00000419387 NTF3P20783 257 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 CT83Q5H943 113 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 WDR73Q6P4I2 378 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 FER1L6-AS1Q8NA97 138 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 TPPP3Q9BW30 176 aa6.16□□□□□ -1.42
NUP50-205ENST00000419387 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
NUP50-205ENST00000419387 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.42
NUP50-205ENST00000419387 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 TMEM218A2RU14 115 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 XKRY2A2RUG3 117 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 F2Z2F3 143 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 M0QY20 66 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 MGPP08493 103 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 CACNG7P62955 275 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 MIAQ16674 131 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 C10orf91Q5T1B1 145 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 UQCC3Q6UW78 93 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 CHAC1Q9BUX1 264 aa6.15□□□□□ -1.42
NUP50-205ENST00000419387 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
NUP50-205ENST00000419387 FAM231BA6NCW3 169 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 A8MWL6 223 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 H7C1H1 209 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 RBX1P62877 108 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 GAGE6Q13070 117 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 ADIRFQ15847 76 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 PRR34Q9NV39 138 aa6.14□□□□□ -1.43
NUP50-205ENST00000419387 IGHV1-24A0A0C4DH33 117 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 SMIM27A0A1W2PRY6 76 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 TRGC1P0CF51 173 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 SUMO4Q6EEV6 95 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 COMMD7Q86VX2 200 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 LINC00269Q8N2A0 174 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 NUP35Q8NFH5 326 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 DEFB104AQ8WTQ1 72 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
NUP50-205ENST00000419387 HIGD1CA8MV81 97 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 PRSS1P07477 247 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 DGAT2L7PQ6IED9 249 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 KRTAP26-1Q6PEX3 210 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 RASL11AQ6T310 242 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 CLPSL2Q6UWE3 100 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 PGLYRP4Q96LB8 373 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 SEC11CQ9BY50 192 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 DPH3P1Q9H4G8 78 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 NIT2Q9NQR4 276 aa6.12□□□□□ -1.43
NUP50-205ENST00000419387 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
NUP50-205ENST00000419387 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
NUP50-205ENST00000419387 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 REG3AQ06141 175 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 PNRC1Q12796 327 aaPredicted RBP6.1□□□□□ -1.43
NUP50-205ENST00000419387 TWIST1Q15672 202 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 RNF185Q96GF1 192 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 TMEM243Q9BU79 118 aa6.1□□□□□ -1.43
NUP50-205ENST00000419387 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 IGLV10-54A0A075B6I4 117 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 A0A1B0GUT8 65 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 F8W036 122 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
NUP50-205ENST00000419387 COTL1Q14019 142 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 GATD1Q8NB37 220 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 NAT8BQ9UHF3 227 aa6.09□□□□□ -1.43
NUP50-205ENST00000419387 CARHSP1Q9Y2V2 147 aaKnown RBP6.09□□□□□ -1.43
NUP50-205ENST00000419387 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 UBE2L6O14933 153 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 RAB4AP20338 218 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 TMEM191AQ9H0A3 160 aa6.08□□□□□ -1.44
NUP50-205ENST00000419387 TRAV26-2A0A0B4J265 109 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms